Sporosarcina psychrophila: AZE41_07300
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Entry
AZE41_07300 CDS
T04327
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spsy
Sporosarcina psychrophila
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsy03400
]
AZE41_07300
DNA repair and recombination proteins [BR:
spsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AZE41_07300
Archaeal homologous recombinant proteins
AZE41_07300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
nSTAND3
nSTAND_NTPase5
DUF7432
ABC_tran
RNA_helicase
DUF7252
Motif
Other DBs
NCBI-ProteinID:
AMQ05736
LinkDB
All DBs
Position
1506196..1509273
Genome browser
AA seq
1025 aa
AA seq
DB search
MRPIQLMMTAFGPYKGTETVDFRELKDNRLFVISGATGAGKTTIFDGICFALYGQASGED
RTDNRAMRSDFADDAVQTTVELTFDIHNRTYRIMRQIPYVKQGNKSETSARCEFYELTED
GEVPLVDRQIVSEINKKVEELIGFTQAQFSQIVMLPQGEFRKFLTSDTENKETIMRKIFK
TDKYREIVEQLKGKKDSAQATLTKEMQQSEGHIGQIATLLPERESSVFTVLANEHYNVNQ
VVQGLEEEFAFYQDKTVVVKKSYDEVYAKHTKMQEMYHAAKSMNERFIELRQKELSLNKL
TEQLPIVEQKEQQIADAERAVSIGELEMQLLKLKEETATKAGNLKNAKEAVQIATEKMEL
AGEHFRVEEARKTDREKLTESLIRLKDFLPAVSSLASKETALGVMKKENNHLEKELGKTV
RMTDEETKNLEKVKVEIEMFEVGQVQYDERIDQLNETIEKCKLLDEFIAIRNRIHVLEQG
KNDHEARYEKSKSEYDAVEQLWLNNQAAMLAESLKDGESCPVCGSEHHPAKSHKTIEVTI
SREKLEVEKERLKEVEGQFRTAAITYQNTIEQLTDKENEMKRLAIEKDNNNLHEVKQKLE
AEVAKLRADRKLLVNLKVELKKKEVITAQIVAQKTEMERALFQQKSSYDTQLALFNMTLQ
TIPEDVRVLATLQERIAETEKKKEELDYAWEVVQKVREETSEKLGSAKVAEIHAGETLEE
VVGKRGQAESRFKKALEESAFPTEQAYREAKMQEVDRILLKEKVAVFKQQLYSLRDAVGE
LRVLLEGKEVVDLSDLATKVAKLKTDYEAALTDYNASSEYEKNAFSLKEKLVQSSVTVIE
LERIYGKITDLYDIVRGQNGLKLSFERYIQIEYLERIIQSANERLKEMSNGQFVLIRSDR
QEVRGRQSGLGLDVYDAYTGQTRDVKTLSGGEKFNASLCLALGMADVIQSFQGSVSIDTM
FIDEGFGSLDEESLNKAIDTLIDLQKSGRMIGVISHVEELKAAFPAILEVKKAKEGHSHT
KFIIK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
gtgagaccaattcaattaatgatgacggcatttggaccatataaagggacggaaacggtc
gatttcagggaattgaaagacaatcgactcttcgttatttcaggagctactggtgcgggg
aaaaccacgatatttgatgggatttgttttgcgctatatggtcaggcgagcggagaagat
cgaacggataatcgtgcgatgcgaagcgacttcgcagacgacgcagttcaaacgaccgtt
gaattgacgtttgacattcataatcgaacgtaccgcatcatgcggcaaataccgtatgtc
aaacaggggaacaagtccgaaacgtctgcgcgctgcgagttctatgaactgacggaagac
ggggaggtaccacttgtcgacaggcagattgtatctgaaattaacaagaaggtagaagaa
ctaatcggctttacacaagcacaattcagtcagattgttatgctgccgcaaggagagttc
cgaaagtttctaacgtctgatacagaaaataaagaaacaatcatgcggaaaatatttaaa
acagataagtaccgtgaaatagtggagcagctaaaagggaagaaagacagcgcacaagcg
actctgacgaaagagatgcaacagagcgaggggcatattggacaaatagcgaccttactg
cccgagcgtgagtcatcggtctttactgttcttgcgaatgaacattacaatgtgaatcaa
gtcgttcaaggattagaagaagaatttgcgttttatcaagacaagacggttgttgttaaa
aagagttacgatgaagtttatgcaaaacatacaaaaatgcaagaaatgtaccacgccgcg
aaaagtatgaatgaacgttttattgaactacgtcaaaaagaattatcgttaaataagtta
acggaacagttgccaattgtggaacaaaaagagcaacaaatagccgacgcagagcgagct
gtttcaatcggtgaacttgagatgcaattactcaaattgaaagaagaaactgccacgaaa
gcaggtaatcttaagaatgcgaaggaagcagtccagatagcaacagaaaaaatggaactt
gctggagagcattttcgagtggaagaagcaagaaaaactgaccgtgaaaagctgacggaa
agtttgatacgactaaaagatttccttccggctgtttcaagtttggcatcgaaggaaact
gctcttggtgtgatgaaaaaagaaaacaatcatttggaaaaagaacttgggaaaaccgtt
agaatgacagatgaagaaacgaagaacttggaaaaagtgaaagtagaaatcgagatgttt
gaagtgggacaagttcagtacgatgaacgtatcgatcaactaaatgaaacgattgaaaag
tgcaaactactggatgaattcattgccattcgaaatcggatacacgtattggaacaagga
aagaatgatcacgaggcgcgttatgagaaaagtaaatcggaatacgatgcagtagaacaa
ctttggctaaataaccaagcagctatgttggctgagtctttaaaagacggggaatcctgc
ccggtatgtgggagtgaacatcatcccgctaaatcgcataaaacaattgaagtaaccatt
tcaagggaaaagctggaagtggagaaagaacggctgaaagaagtcgaggggcaattccga
accgcggctattacctaccaaaatacaatcgagcagttaactgataaagaaaatgaaatg
aagcggttagctatagaaaaggataataataatttacatgaggtaaaacagaagctagaa
gcggaagtggctaagcttcgcgcagatcgaaaattgcttgttaatctgaaagtggaattg
aaaaagaaagaagtaattacagcgcaaatcgtggcgcagaaaactgaaatggaacgtgca
ttgtttcaacaaaaatcgtcctatgatacacaactagccctgtttaacatgacattacaa
acgatacccgaagatgtacgggtactagccacgcttcaggagcggattgctgaaactgaa
aagaaaaaagaagaattagattacgcttgggaagtagtccagaaagtgcgtgaggaaacg
agcgagaagctggggtcggcgaaagtagcagaaattcatgctggggaaaccttggaagaa
gttgtagggaagagggggcaggcggaaagtagattcaaaaaagcattagaagaatcggca
ttcccaacagaacaggcttatcgtgaggcgaaaatgcaagaagttgaccgcattttgttg
aaagaaaaagtggcggtattcaaacaacaactttatagtttacgcgatgcagtaggggag
ttacgggtactgcttgaagggaaagaagtggtggatttgagcgatttggcaacgaaagtg
gccaaattgaaaactgattatgaagccgctcttactgactataatgcttcttcagaatat
gaaaaaaacgcattcagtttgaaggagaaacttgtacagtcatccgtaacagtgattgaa
cttgaacgaatatatgggaaaatcacagacctttacgatatcgtaagaggacagaacggt
ttgaagttgtcattcgaacgctatattcaaatcgaatacttggaacgtattatccaatcg
gcgaatgaacgtttgaaagaaatgtcgaacgggcagtttgtcttaatccgcagtgaccgt
caggaagtacgagggagacaaagtggactgggtctcgatgtatatgatgcttatacaggg
caaacacgtgacgtgaagacattgtcaggtggcgaaaagttcaatgcctctctctgtcta
gcacttggtatggcagatgtcattcaaagtttccaaggttcggtgtcaattgatacgatg
tttattgacgaaggattcgggtcacttgatgaagagtcgttgaacaaagcaattgacaca
ttaattgatctgcagaaatcaggtcgtatgattggcgtcatttctcacgttgaagaactg
aaagctgcattccctgcgattctcgaagtgaaaaaagcaaaagaaggccatagtcacacg
aagtttattattaaatga
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