Sporosarcina psychrophila: AZE41_09065
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Entry
AZE41_09065 CDS
T04327
Name
(GenBank) competence protein ComE
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
spsy
Sporosarcina psychrophila
Pathway
spsy00240
Pyrimidine metabolism
spsy01100
Metabolic pathways
spsy01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AZE41_09065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spsy02044
]
AZE41_09065
Enzymes [BR:
spsy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
AZE41_09065
Secretion system [BR:
spsy02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
AZE41_09065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC4_like
DUF1541
FTA2
APOBEC2
Motif
Other DBs
NCBI-ProteinID:
AMQ06061
LinkDB
All DBs
Position
1891132..1891695
Genome browser
AA seq
187 aa
AA seq
DB search
MERITWDQFFMAQCHLLAVRSTCTRLSVGASIVRDNRIIAGGYNGSISGGDHCIDHGCYV
IESHCVRTIHAEMNALLQCSKYGIPVAGSTLYVTHFPCLQCSKAIIQAGIKHVIYATDYK
NDEYALKLFTQSDVSVQHIPFDEKKVDFSSESKLELINEMLLKMQALGAGNEELAPYKKR
VDSLFDK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaataacgtgggaccagttttttatggcccagtgccatctattagcagtaaga
agtacatgtacaagactttctgtcggagcatcaattgtaagagataaccggatcattgca
ggcggctacaacggttccatatcagggggagaccactgtattgaccatggttgctatgtc
attgagagccactgtgtgaggacaatccatgcagagatgaatgcattgctgcaatgttcg
aagtatggcatacctgttgcaggatcaacgctgtatgtgacgcacttcccatgcctacaa
tgttcgaaagcaattattcaagcaggcattaagcatgtcatctatgcaacagattataaa
aacgacgaatatgcattaaagttatttacacagtcggatgtttccgttcagcatattccg
ttcgatgaaaagaaagtcgacttttccagcgaaagtaagttagaacttatcaatgaaatg
cttctaaaaatgcaggcactaggcgctgggaatgaagaacttgccccctataaaaaaagg
gtggatagcttattcgacaaatga
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