KEGG   Sporosarcina psychrophila: AZE41_15135
Entry
AZE41_15135       CDS       T04327                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
spsy  Sporosarcina psychrophila
Pathway
spsy02024  Quorum sensing
spsy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AZE41_15135
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AZE41_15135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spsy03019]
    AZE41_15135
   03036 Chromosome and associated proteins [BR:spsy03036]
    AZE41_15135
Messenger RNA biogenesis [BR:spsy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AZE41_15135
Chromosome and associated proteins [BR:spsy03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    AZE41_15135
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AMQ07156
LinkDB
Position
complement(3167601..3167828)
AA seq 75 aa
MKQVNMQETFLNSLRKNNTFVTVFLLNGFQLKGLIKSYDNYTVLLESDGKQQLIYKHAIS
TYVPTKPVILKDETE
NT seq 228 nt   +upstreamnt  +downstreamnt
atgaaacaggttaacatgcaagaaacgtttttaaactcgttacgaaagaataatacattt
gtaacggtattcttactgaatggatttcaattgaaaggacttattaaatcgtatgacaat
tataccgtcttgcttgagtcggacggcaagcaacaactaatttataaacatgcgatctcc
acatatgtcccaacgaaaccggtaattttaaaagacgaaacggaataa

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