Sporosarcina psychrophila: AZE41_15185
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Entry
AZE41_15185 CDS
T04327
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
spsy
Sporosarcina psychrophila
Pathway
spsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZE41_15185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spsy03019
]
AZE41_15185
Messenger RNA biogenesis [BR:
spsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AZE41_15185
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
GAGA_bind
Motif
Other DBs
NCBI-ProteinID:
AMQ07164
UniProt:
A0A127W0Z0
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All DBs
Position
complement(3179033..3180592)
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AA seq
519 aa
AA seq
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MSLGLIISALLGLLVGAVVTYFFNKKVNDSKVSGAKFTAEQIVEEAKREADALKKEALLE
AKDETHKLRIEAESEIRERRAELQKQESRLLQREENHDRKDEALNKRDAGLERKEEALTG
RQQHIEQMEQKAEELVSVQKTELEKISSLTRDEAKRLILSEVEKELATDIAVMTKESEQR
AKEESDKKSREILSIALQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPVRRETARLALEKLVQDGRIHPARIEEMVDKSRREVDELIRE
TGEQTTFDIGIHNLHPDLIKIIGRLRFRTSYGQNVLKHSTEVAYLAGLLAAELGEDVTLA
RRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEATSVIAVLVA
AADALSAARPGARSETLENYIRRLKKLEEISESYDGVEKSFAIQAGREVRIIVRPDQIDD
ITAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaggattgattatctccgctttgctcggtctgctcgttggtgccgttgttacc
tatttctttaataagaaagtgaacgattcaaaagtgagtggtgccaaatttacggcagaa
caaatcgtcgaagaggcgaagcgtgaagcggatgctcttaaaaaagaggcactactagaa
gcgaaggatgaaactcacaaactgagaattgaagcggaatcagagatccgtgaacgaagg
gcggaactgcaaaaacaagaaagccgtcttttgcaacgggaagaaaatcatgaccgtaaa
gatgaagctctcaataaaagagacgcaggtctggagcgcaaagaagaagcgcttaccgga
agacaacagcatatcgaacagatggaacaaaaagcggaagaacttgtttcggttcagaaa
actgaacttgaaaagatatcatcactgacacgtgatgaggcgaaaaggctcatccttagt
gaagtggagaaagaacttgctacagatatcgctgtaatgacaaaagagtcagagcaacga
gcaaaagaggaatcggataaaaaatcgcgtgaaatcctttccatcgctttacaacgtttt
gcagcagaccacgttgctgaaacgactgtgtcggtagttaatctaccgaacgatgaaatg
aagggccgtattatcggtcgtgaaggacgtaatatccgaacactcgaaacgttgacagga
attgacctaataatcgacgatactccagaagcggtcatcttgtcaggctttgatccggta
cgtcgggaaactgcacgacttgcattagagaaacttgtacaagatggacgaattcaccca
gcacgcattgaagagatggttgataaatcgagacgtgaagtggatgaactcatccgcgaa
actggagaacagacaactttcgatattggcattcataatctacacccagatcttattaaa
atcatcggaagattgcgtttccgcacaagttatggccaaaacgtcttgaagcattcaaca
gaagttgcttatctagcaggtttattggcggcagaacttggagaagatgttacgcttgca
cgacgtgctggactccttcatgatatcggaaaagcgattgaccatgaagtagaaggaagt
cacgttgaaattggtgttgaacttgcaacgaaatacaaagaacatcctgttgttattaac
agtatcgcatcccatcatggggatactgaagcgacatcagtcattgccgtattggttgca
gcagcagatgcattatccgctgcaagaccaggagcgcgcagtgaaacgcttgaaaattat
atccgcagactgaaaaaacttgaagagatttctgaatcgtacgacggtgtggagaaatca
tttgccatccaggcaggacgcgaagttcgaattattgtccgcccagaccaaatcgatgat
attacagcccatcgtctagcacgagatatccggaaacggattgaagaagagctcgattat
ccaggacatattaaagtaacggtcatccgtgagacacgggcggtcgaatacgcaaaataa
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