Sporosarcina psychrophila: AZE41_15595
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Entry
AZE41_15595 CDS
T04327
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spsy
Sporosarcina psychrophila
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsy03032
]
AZE41_15595
03400 DNA repair and recombination proteins [BR:
spsy03400
]
AZE41_15595
Enzymes [BR:
spsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AZE41_15595
DNA replication proteins [BR:
spsy03032
]
Prokaryotic type
DNA Topoisomerases
AZE41_15595
DNA repair and recombination proteins [BR:
spsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AZE41_15595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DapH_N
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AMQ07242
LinkDB
All DBs
Position
complement(3264714..3266789)
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVRASLGHLRDLPRSQMGVDTENDFEPKYITIRGK
GPILQDLKKEAKKAKKIFLAADPDREGEAIAWHLANQLGVDIESDCRVVFNEITKEAIKE
SFKNPRPIDMDRVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVALRMIIDREN
EINAFVPEEYWSISGQFEKDDTTFEADFFGDSKKKVKLTDKQQVDEILSRLSGDTFDIAN
VVKKERKRNPALPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGINLGKEGQVGLITYMR
TDSTRIADSAKEEARSFIETMYGQEFVATSKPAAKSSTAKTQDAHEAVRPTSVMRPPAAM
KTVLSRDQLRLYKLIWERLVASQMAPAVLDTVAVDLVNGDVRFRANGSQVKFQGFMKVYV
EGDDDKEEEKDRILPPLEEGEQVKFSEIDPKQHFTQPPPRFSEARLVKTLEEQGIGRPST
YAPTLDTIQKRGYVVLDAKRFLPTELGGIVHQAVDQYFPNIIDLEFTAQMEKELDNVEHG
LIKWKKVIDNFYGDFEKHVQIADAEMEKIEIKDEPAGEDCEKCGSPMVYKLGRYGKFMAC
SDFPDCRNTKAIIKPIGVTCPTCKEGQVVERKSKTKRIFYGCDRYPECEYVSWDKPITRP
CPKCESTLVEKKLKKGVQIQCTECDYKEDTQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagactacctagtaattgtggaatcgcccgcaaaggcaaaaacgattgaacgctat
ctcggaaaaaaatataaagtgcgtgcatcactcgggcatttacgtgatcttccacgaagt
cagatgggcgtagataccgaaaatgatttcgaaccgaaatacattacgattcgcggcaaa
ggcccgattcttcaagatttgaaaaaagaagcgaaaaaagctaaaaaaatctttctcgca
gctgaccccgacagagaaggggaagcgattgcgtggcatttggcaaaccagcttggcgta
gatatcgaatcagattgtcgagttgttttcaatgaaataacaaaagaagcaattaaagaa
tcatttaagaatccacgtccaatcgatatggatcgtgtcgatgctcaacaagcccgccga
attttagatcgacttgtaggctacaacatcagccctatactttggaaaaaagtgaaaaaa
gggttatccgctggccgggttcaatccgtcgcacttcgcatgattatcgacagagaaaat
gaaatcaatgcattcgttcctgaagaatactggagcatctccggtcaattcgaaaaagac
gatacaacattcgaagcggatttcttcggcgattcgaagaaaaaagtaaaacttacagac
aaacaacaggtcgatgaaatcttaagccggttaagcggagatacattcgatattgcgaat
gtggttaaaaaagagcgcaaacgaaatccggcattgccgttcacgacttcatctttgcaa
caggaagcggcacgaaagctaaacttccgagcgaaaaaaacaatgatgcttgcccaacag
ctttatgaagggatcaaccttggtaaagaaggtcaagttggtctaattacgtacatgaga
actgattcgactcgaattgccgatagcgcaaaagaggaagcaagatcattcatcgaaaca
atgtatgggcaagaatttgtagcgacatcaaagccagcagctaaaagcagtaccgcaaaa
acgcaggacgcacacgaggcagtacgcccgacatctgttatgcgaccacctgcagctatg
aaaacagtattgtcacgggatcaactacggctttataaactcatatgggaacgactcgtc
gccagtcaaatggcgccagcggtactcgatacggttgcggtcgatcttgtgaatggtgat
gttcgcttcagggcgaatggttcgcaagttaaattccaagggttcatgaaagtgtatgtt
gaaggtgatgatgataaagaagaggagaaagaccgtatcctcccgccgcttgaagaaggc
gaacaagtgaagtttagtgaaatcgatcccaaacagcactttacccagccaccaccgagg
ttttcggaagcgagattggtcaagacgcttgaggagcagggaataggtcgtccatcaaca
tacgcaccgacgctcgacacaatccaaaaacgaggctatgtcgtcctcgatgcgaaaaga
ttccttccgacagaacttggcggtattgttcaccaggccgtagatcaatacttccctaat
attatcgaccttgagtttacagctcaaatggaaaaagaacttgataatgtggagcatggt
ctgattaaatggaagaaggttattgataacttctatggcgattttgagaagcatgtgcaa
atcgcagatgcagagatggaaaaaatagaaatcaaagatgaaccagctggcgaagactgt
gagaaatgcggttctcctatggtctataaattgggtcgatacggcaagtttatggcttgt
tccgattttccggattgccgcaatacgaaagctattatcaaaccaatcggtgtgacttgt
ccaacatgtaaagaaggacaagtcgtcgaacggaaaagtaagacaaaacgtatattttat
ggctgtgacagatatccggaatgtgaatacgtttcatgggataagccgattacaagacca
tgtccgaaatgcgaaagcacgctagttgaaaagaaactgaaaaaaggtgtacagattcaa
tgtacagaatgtgattataaagaagatacgcagtaa
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