Sporosarcina psychrophila: AZE41_17035
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Entry
AZE41_17035 CDS
T04327
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spsy
Sporosarcina psychrophila
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsy03400
]
AZE41_17035
Enzymes [BR:
spsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZE41_17035
DNA repair and recombination proteins [BR:
spsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AZE41_17035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMQ07501
LinkDB
All DBs
Position
complement(3563249..3566746)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSLRFITGRSGAGKTTFIEREMAAELERDPMGAPVIVIVPDQMSFSMEHSLSVNFGLKGI
IRAQVLTFKRLAWRVLQETGGITRKEIDGFGYRMLVRSVLEDNRDQFKLFRQAANKRGFT
EQIGDLLKEFSRYCLDHQTMSNLHDALASTGAPRTLLDKAEDLSLLLTKIEEKLGTTYVD
SEGHLALLASQIAHSDLLKGADIYIDGFENFTTREYEIVTELMKHANRLTVVLPMEGALT
GFADHELFFNPVRTSLKLRELARAESVEVEEDVHLANSPRYQNEDLKHFEAEFDHYPAKQ
QPSAGNVVLIEAADRRAEIHSVARTIRELMIAGKRYKDVSILYRQPEKYDELIETIFPHY
DIPVFISQKKPMLHHPLIEFSRSVLEAVTTGWSYESVFRAVKTDLFFPHRETKLLWRDRA
DRLENYVLAHGIYGQRWFDDSRWRVKKYRGLELHSNVQTDEEIAMEQELHVIRDEIRDPL
TDFEKRLKRSKTGRDVAEALFLFMENLNVYDKIIDLRAEEERAGRLLGATEHEQAWNGWI
NVLDQFVLMFGDKKMDAVEAARILDEGFDSLEFARIPPSLDQVTVSTVEVSSLMEIDAVF
VLGVNDGVMPKRVDNEGLLSDADREWFSEIGFELAPTSKMKLMDETYMAYRAFTAPREKL
YVSYPIADEEGKALIPSLYITRIAQMLPGTETKIAVTDPSELSLEANQFDYISHPRSALP
YVSMKLKEAEQSGVLEREWRAVMAYYDEDPYWSSVISHIIRPMNAKNGAERLRPEITEGL
YGESFVSSVSRIESYYSCPFQHYASFGLGLRERTEFTLEAPAIGDLFHAALKWVSDETMR
LDKSWAELTREECWKLARAAVEDISPYFFNRILLSTNRYVYIKRKLMHIIQRTIYSLSTQ
AKSTVFKPVAIEAGFGPGEELPALEIPLRRGDSMKLRGRIDRVDATEIGGKNYVRVVDYK
SSAKSLDLTEVYYGLSLQMMTYLDVALENADEWLGIHADPAGILYMHIHNPMIRSGSELT
PALLEAEIAKSYKMRGYLLDNQEVVIGMDADIGRSSSIVPASIKTDGTFAKTSKVLSSDD
LQMMRSFVRTRHQKAGDAMLAGDTRVYPYKLKNKMPCEFCSYRSVCQFDQTDPSAEHRSY
AEMDPELTLDKMRKEVGDDAHTRET
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcactacgtttcataaccggtagatcgggcgctggaaagacgacgttcattgagcgg
gagatggctgctgaattggaacgagatccaatgggagcgcctgttattgtcattgtgcct
gaccagatgtcgttttcgatggagcatagcttgtccgttaatttcggattaaaagggatt
atccgtgcacaagtattgacgttcaagcggttggcatggcgtgtgctgcaggaaacaggt
ggcattacgcgcaaggaaatagatggtttcgggtacaggatgcttgtacgaagcgtttta
gaagacaatcgggaccagttcaaattgttccgacaagcggctaataaacgtggattcacg
gaacaaattggggacttgctgaaggagtttagtcgctattgcctcgaccatcaaacgatg
agcaatctccatgatgcactagcttcaacaggtgcaccacgcacattgctcgacaaagcg
gaagacttgtcattattgctgacaaaaattgaagaaaagctgggtacaacttatgtcgat
agtgaaggacacttggctctacttgcttcacaaattgcccattcagacctgttaaaaggg
gcagatatttatatcgacggttttgaaaatttcacgacgcgggaatatgaaatagtcacg
gaactgatgaaacacgccaatcgactgacagttgtgttgccgatggaaggcgctctcaca
gggtttgcggaccatgaattatttttcaatcccgtaaggacctccctcaaattgcgtgaa
ctggcacgtgctgaatcggtggaagtagaggaagatgtccatttggcgaattcgccacgt
tatcaaaatgaagacttaaaacattttgaagcggaattcgaccactatcctgcgaagcaa
caaccgtcagctggcaatgtggtcttgattgaagcagcggaccgtcgtgcggaaatccac
tcagtggcgcgtacaatccgtgagttaatgattgcaggcaagcgttacaaagacgtttca
attttgtacaggcagcctgaaaaatatgatgaattgattgagaccatttttccacattat
gatattccggtgttcatcagccagaagaaaccgatgttgcatcatccgcttatcgagttt
tcacgttcggtgttagaagcggtgacaacgggttggtcatatgaatcggtgttccgcgca
gtaaaaacagatctctttttcccacaccgagaaaccaagttattatggcgtgatcgagca
gatagactcgaaaactatgttcttgcacatgggatttacggacagcgttggttcgatgac
agccgttggcgcgtgaaaaaataccgcggtcttgaattgcattcaaatgtgcaaaccgac
gaagaaatcgcgatggagcaagaactgcatgtgattcgtgatgaaattcgggatccgctt
actgattttgaaaaacgtttgaaacggtccaaaacgggacgtgatgtcgcggaagcgctg
tttttattcatggaaaacttaaatgtctatgataaaatcatcgatctgcgtgcggaagaa
gagcgtgcaggacgattacttggcgcaacggaacatgaacaagcttggaacggctggatt
aatgtactagatcagttcgtccttatgttcggcgataaaaaaatggatgctgtagaagca
gctcggattttggatgaaggatttgattcactcgaatttgctcgcattccgccgtcgctc
gaccaagtgacggtgtcgactgtcgaagtttcaagcttaatggaaattgacgctgtattt
gtccttggggtgaacgatggcgtcatgccgaagcgggttgacaatgaagggcttctgtca
gatgccgaccgtgaatggttctcggaaatcggctttgaactagctccaacgtcgaagatg
aaattgatggatgaaacgtatatggcctatcgtgcatttacggcaccgcgcgaaaaatta
tatgtgtcgtatccaattgcagacgaggaagggaaagcacttattccgtcgttgtatatt
acgagaattgcgcaaatgctgccaggaactgaaactaaaatagcggtaacggatccatcc
gaattgtcgctagaagccaatcaattcgattacattagccacccgcgttcggcacttcct
tatgtatcaatgaagttgaaagaggcggaacagtcgggtgtgttggaacgtgaatggcgt
gcagtgatggcgtattacgacgaggatccgtattggtcgtctgtcatcagtcatatcatt
cgcccgatgaacgcgaagaatggggcggaacgactgcgtccagagataacggaagggttg
tacggggagtcatttgtttccagtgtgtcacgcattgaatcctattacagctgtccgttc
cagcattacgcctcgtttggacttggtttgcgcgaacggacagaatttacgctggaagca
ccggctatcggggatttatttcacgcggctttaaaatgggtgtccgatgaaacaatgcgc
ctcgataagtcgtgggcagagctgacgcgcgaagaatgttggaagcttgcgagagcagcg
gtggaagatatttctccttacttctttaatcgaatactattatcaacgaatcgttatgtt
tatattaaacgtaagctcatgcatattattcagcgaacaatttattcccttagtacgcag
gccaaatcgacggtattcaaaccggttgccattgaggcaggatttggacccggcgaagaa
ctgccagcgcttgaaattccattgcgccgtggtgattcgatgaaactgcgtggccgaatt
gaccgtgtcgatgcgaccgaaattggcggtaaaaactatgtccgtgttgtcgattacaaa
tcatctgccaaaagccttgatttaacagaagtctattacggcttgtccttgcaaatgatg
acctatcttgacgtagcgctagaaaatgcagacgaatggctcggaatacatgcggatcca
gcgggcattttgtatatgcatattcataacccgatgatccgctccggttccgaattaaca
cctgcactccttgaagcggaaatcgcgaaatcctataagatgagaggctatttgctcgat
aatcaggaagttgtcatcggcatggatgctgatattggcagatcctcttcaatcgtgcca
gcctcgattaaaacggatggaacttttgcgaaaacgtcaaaagtattgtcatccgatgat
ttgcagatgatgcggtcgtttgtcagaacgcgccatcaaaaagccggagatgccatgctt
gcgggcgatacccgcgtctatccctataaattaaaaaataaaatgccatgcgagttttgt
tcgtatcgatccgtttgtcagttcgatcaaacagatccgtcagcagagcatcggtcttat
gccgaaatggacccagaattaactctcgataaaatgcgtaaggaggtgggggatgatgca
catacccgtgaaacctga
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