Sporosarcina psychrophila: AZE41_17370
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Entry
AZE41_17370 CDS
T04327
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spsy
Sporosarcina psychrophila
Pathway
spsy00061
Fatty acid biosynthesis
spsy00071
Fatty acid degradation
spsy01100
Metabolic pathways
spsy01212
Fatty acid metabolism
spsy02024
Quorum sensing
spsy04146
Peroxisome
Module
spsy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AZE41_17370
00071 Fatty acid degradation
AZE41_17370
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AZE41_17370
09145 Cellular community - prokaryotes
02024 Quorum sensing
AZE41_17370
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spsy01004
]
AZE41_17370
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsy04147
]
AZE41_17370
Enzymes [BR:
spsy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AZE41_17370
Lipid biosynthesis proteins [BR:
spsy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AZE41_17370
Exosome [BR:
spsy04147
]
Exosomal proteins
Exosomal proteins of breast milk
AZE41_17370
Exosomal proteins of breast cancer cells
AZE41_17370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GATase1_like
LVIVD
Motif
Other DBs
NCBI-ProteinID:
AMQ07562
LinkDB
All DBs
Position
complement(3642250..3643803)
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AA seq
517 aa
AA seq
DB search
MNLVTRVHETAMTQPEKAAYHFMGKDTSYAEFDQSVSMFASALQDLGVGKGDHVAFLLGN
TPHFLISLYATMRIGATAIPVNPIYTPDEISYIIHNSDAKAVIALDLLLPLVEQAAGAFP
TVEHYVICETVPETPEKIAALPAAVKSKVRSFTQLITTGRPNQEPVVVDENETAIILYTS
GTTGQPKGAMLTHGNLYSNARDVADYLDFTEDDRVVATLPVFHVFALTVVVNAPLVKGAT
ILLLPRFSPAEVFKVVKEQQATIFAAVPTMYNFLYQFPDADPSDFKSVRTTISGGSSLPV
ALLHNFEEKFNVRVSEGYGLSEASPVTCFNPTDRERIPGSIGTNIINVENKVVDELGNEV
PDGEVGELIVRGPNVMKGYYKMPEETESAIRNGWLYTGDMAKRDENGYFYIVDRKKDLVI
VGGYNVYPREVEEVLFAHRDIIEAAVIGLPDPDFGEEVHAFVVLKEGVKEDKEALIAYCA
ARLAKYKVPKQIEFLDELPKNTTGKILRRSLKDQVKI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagttacgcgagtacacgaaactgcaatgacacagcctgaaaaagcggcttat
cactttatggggaaagatacatcatatgcagaattcgatcaatcggtatccatgttcgca
tctgcactgcaagaccttggcgttggcaaaggggatcacgtcgcatttctgctaggtaat
acacctcatttccttatatcgctttacgcgacaatgcgaattggtgcaacagcaattccg
gtcaatccaatttacacgccagacgaaatttcgtatatcatacataacagtgatgcgaaa
gcagttatcgcgcttgaccttctgctgccacttgttgaacaggctgcgggcgcattccca
actgttgagcattatgtaatttgcgaaacggttccggaaacaccagagaaaatcgccgca
cttccggctgcagtgaagtcgaaagtccgttcattcacacaactcattactacaggaaga
cctaatcaggaacccgttgttgttgatgaaaatgaaaccgctatcattctgtatacatca
ggtacgacgggacagccaaaaggcgcgatgctgacacatggtaacctgtattcaaacgcg
cgtgatgtggcggattacttggatttcacggaagatgaccgtgttgtagcgacgctgccg
gtattccatgtcttcgcgcttacagtcgttgtcaatgcaccactagtaaaaggtgcaacg
attttattgctaccgcgctttagtccagcagaagtatttaaagtcgtgaaagaacagcag
gcgactattttcgcggctgtgccaacaatgtacaatttcttataccagttcccagacgct
gatccgagcgatttcaaatctgttcgaactacaatttctgggggatcatcattaccggtc
gcattgctgcataatttcgaagagaaattcaatgtaagggtttctgaaggatacggcttg
tctgaagcatcacccgttacatgctttaatccgactgaccgcgagcgtattccaggttca
atcgggacgaatatcatcaatgtcgaaaacaaagtcgttgatgaattgggcaatgaagta
ccagatggggaagtcggcgaattaatcgtacgcggaccgaacgtcatgaaaggctattac
aaaatgcctgaagaaacggagtccgctatccgcaatggctggttgtacacgggggatatg
gcgaaacgcgacgaaaatggctatttctacattgtcgatcgtaaaaaggatcttgttatc
gtcggaggctataacgtttatccacgtgaagttgaagaagtattattcgctcaccgtgac
atcattgaagcggcggtcattggcttacctgatcccgatttcggtgaagaggtccatgca
tttgttgtcttaaaagagggtgtcaaagaggacaaagaagcattgatcgcatactgtgcg
gctcgtttggcgaaatataaggtaccaaaacaaatcgagtttttagatgaactgccgaaa
aacacgactggtaaaatattgagacggtcattgaaagaccaagtgaaaatctaa
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