Sporosarcina psychrophila: AZE41_21290
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Entry
AZE41_21290 CDS
T04327
Name
(GenBank) hypothetical protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
spsy
Sporosarcina psychrophila
Pathway
spsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AZE41_21290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsy03000
]
AZE41_21290
Transcription factors [BR:
spsy03000
]
Prokaryotic type
Helix-turn-helix
Other families
AZE41_21290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
HTH_3
TPR_1
TPR_10
TPR_7
HTH_31
DHR-2_Lobe_A
Motif
Other DBs
NCBI-ProteinID:
AMQ08266
LinkDB
All DBs
Position
complement(4537775..4539070)
Genome browser
AA seq
431 aa
AA seq
DB search
MKVGHLIRAERIRQEMKQLVLAKGICTPSYLSKIERNLIFPSEDIVTLLFNRLGIDSSKL
QKNNQQTEIDFEKMLEATYKEAVTNRDQSFTKQKLEYLEQHSPLFENRTLHYTYLLIVLR
FRIISGGNLNEIKKGIKDLEELSKEFNLRQTYLYKVNKAIYNYSTENRNKSIEYFEDVLL
LVDEILLEAWEKAELNYMIGLVYTADSRIFASIEYTRRALEYFRENFLMKRVLECYILIG
ITHKKSEQFQDAYDSYLKAMQICDEFNLLQEKGIVYHNLGSLSSIMGNNEEAISYYKQSM
EYKTYEKNPIISILCLVIEYSKMNNKALVKVWCDEGISLFLKLKDKSLTSYYHHFNIFES
LHSERGLSESITEEAIEYFKEVQDYRYVHKYYLALAEWYFSNRKYKLSSICYQEANKYEN
IFRKIKKWEDL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttggtcatttaataagggcagaacgaattagacaagaaatgaagcaattagta
ttagcaaaaggaatctgtacgccatcttacctatctaaaatcgaacggaatttaattttc
ccaagcgaagacatagtcacgttattatttaatcgtttaggaatagattcttcgaagtta
cagaaaaataatcagcaaactgaaattgattttgaaaagatgctagaggctacttacaag
gaagcagttacaaatcgagatcaaagttttactaaacaaaaactagagtacttagaacaa
cacagtcccttattcgaaaatcgaacgctccactatacttatcttctgattgtactaagg
ttccgcattatttcaggcgggaatttgaatgaaataaaaaagggaattaaagatcttgaa
gaattaagcaaagagtttaacctacggcaaacctatttatataaagtgaataaggcaatt
tacaattattcaacagaaaatcgcaataaatcgattgaatatttcgaagatgtgttatta
ttagtcgatgagattttattagaagcttgggaaaaagcggaattgaattatatgataggg
ctagtttacacagcagatagtcgtatctttgcctcaattgaatatacaagaagagctctt
gaatatttcagggaaaactttttaatgaagagagtattagagtgttacatacttattgga
atcacacacaagaaaagtgagcaatttcaagatgcgtatgattcttatttaaaagcaatg
caaatatgtgatgaattcaatttacttcaagaaaaaggaattgtgtaccataacttagga
tcattatctagtataatgggcaataacgaggaagcaatttcttactataaacaaagcatg
gaatataaaacttatgaaaagaatccaattatttcaatactttgtttagtgattgaatac
tcaaagatgaacaataaagcgttagttaaagtgtggtgtgacgaaggaatttcattgttt
ttaaaattaaaagataaaagtttaacatcgtattatcatcattttaatattttcgaatcc
ctccatagtgaacgaggtttatccgaaagtattactgaagaagcaattgaatactttaaa
gaagtacaagattaccgatatgttcacaaatactatttagcacttgccgaatggtatttt
agtaatcggaaatacaagctatcatctatttgttatcaagaggcaaataagtatgaaaac
atttttagaaaaataaaaaaatgggaggatttataa
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