Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150: SPA0194
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Entry
SPA0194 CDS
T00219
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
spt
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Brite
KEGG Orthology (KO) [BR:
spt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spt03016
]
SPA0194 (ligT)
Enzymes [BR:
spt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SPA0194 (ligT)
Transfer RNA biogenesis [BR:
spt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SPA0194 (ligT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AAV76227
UniProt:
A0A0H2WMP3
LinkDB
All DBs
Position
complement(221977..222507)
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AA seq
176 aa
AA seq
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MSEPKRLFFAIDLPDDARAQIIAWRAAHFASEDGRPVAAANLHLTLAFLGDVSNDKQCAL
VQLAGRIRQPGFTLHLDDAGQWLRSRVVWLGMRQPPRGLLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDASHTVAIPPPGFCWSFPVTSFALYASSYGQGRTRYAELQRWTLSE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccaaaacggctgttttttgctattgacttacccgacgacgcgcgcgcgcaa
attatcgcctggcgcgccgcccattttgcgtctgaagacggacgccccgtggcagcggcg
aacctacacctgacgctggcctttttaggcgacgtcagtaacgataagcagtgcgcgctt
gtgcaactggccggacgaattcgccagccgggctttacgctacatctggatgacgccggt
cagtggctgcgttcgcgcgtagtgtggctggggatgcgccagccgccgcgcgggttgttg
cagttggctaatatgctgcgcgcgcaggccgcccgcagcggttgttaccaaagcccgcag
ccttttcacccgcatattacgctgctgcgcgacgccagccatacggtggctatcccgccg
ccgggcttttgctggtcatttccggtcacatcgtttgcgctttacgcctcttcgtatggg
caaggccgtacccgctatgccgaactgcagcgctggacgctgagcgaataa
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