Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150: SPA0238
Help
Entry
SPA0238 CDS
T00219
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spt
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Pathway
spt03030
DNA replication
spt03430
Mismatch repair
spt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPA0238 (dnaE)
03430 Mismatch repair
SPA0238 (dnaE)
03440 Homologous recombination
SPA0238 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spt03032
]
SPA0238 (dnaE)
03400 DNA repair and recombination proteins [BR:
spt03400
]
SPA0238 (dnaE)
Enzymes [BR:
spt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPA0238 (dnaE)
DNA replication proteins [BR:
spt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPA0238 (dnaE)
DNA repair and recombination proteins [BR:
spt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPA0238 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AAV76267
UniProt:
A0A0H2WME2
LinkDB
All DBs
Position
273694..277176
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFNVHNELLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIERDW
LVELKDGLILLSGGRMGDVGRCLLRGNQALVEECVAFYEAHFPDRYFLELIRTGRQDEET
YLHAAVELAEARGLPVVATNDVRFLESDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKSKEGL
EERLAFLFPDEEERKKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIDARNQGGYFRELFDLCARTDTKRLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgttcacctgcgggtgcacagcgactactctatgatcgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggcctcattaggtatgcctgcgctggcg
atcaccgattttaccaacctctgcggtctggtgaagttctacggagcgggtcatggcgcg
ggcattaaacccatcgtcggggcggactttaacgttcacaacgaactgctgggagatgag
ctgactcatctgacggtactggcggcgaataatacgggataccagaacctgacgttgctg
atctcgaaagcgtatcagcgcggctacggcgcggcaggcccgattatcgagcgcgactgg
ctggtagagcttaaagatggtttgatcctgctttccggcgggcgcatgggcgacgtaggc
cgctgtctgctacgcggcaaccaggcgctggtggaggagtgcgttgctttctatgaagcg
cattttcccgatcgctacttcctggaactgatccgtaccggcagacaggatgaagagacc
tatctccatgctgcggttgaactggctgaggcacgtggtttgccggttgtcgcgacaaac
gatgtccgttttcttgaaagcgatgattttgacgcccatgagattcgtgtcgcgatccac
gacggtttcacgctcgacgatcctaaacgtccacgcaattattcaccgcagcagtatatg
cgcagtgaagaagaaatgtgcgagctgttctccgatattccggaggcgctggaaaatacg
gtggagattgccaaacgctgcaacgtaacggtgcgtctgggtgaatatttcctgccgcag
ttcccgaccggcgatatgaccaccgaagattatctggtcaaaaaatcgaaagaggggctg
gaagaacgtctggctttcctgtttccggacgaagaagagcgcaaaaagcgtcgcccggaa
tatgacgagcgtctggatattgaactacaggttatcaaccagatggggttccctggctac
ttcctcatcgtgatggagtttatccagtggtcaaaagataacggcgtgccggtagggccg
ggacgtggttccggggccggttcgctggtggcctacgcgctgaaaattaccgaccttgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgtgtctcgatgcct
gacttcgacgttgacttctgtatggagaaacgcgaccaggtgattgagcacgtcgcagac
atgtacgggcgtgatgcggtatcgcagattatcaccttcggtacgatggcggcgaaagcc
gttatccgcgatgtgggccgcgtgctggggcatccgtacggttttgtcgatcgtatctcg
aagctggtgccgcccgatccgggcatgacgctggcaaaagcctttgaagcggaaccgcaa
ctaccggaaatttacgaggcggacgaagaggtcaaagcgctgatcgatatggcgcgtaag
ctcgaaggtgtcacgcgtaacgccggtaagcacgctggcggcgtggtcatcgcgccgacc
aaaattaccgactttgcgccgctatactgcgatgaagagggcaagcatccggttacccag
tttgataaaagcgacgtggaatatgccgggctggtgaagttcgacttcctcggtttgcgt
acgctgactatcatcaactgggcgctggagatgatcaacaagcggcgggcgaagaatggc
gagccaccgctggatatcgccgccattccgctggacgataaaaaaagcttcgacatgctg
caacgctcggaaaccacggcggtcttccagcttgaatcgcgcggtatgaaagacctgatc
aagcgtctgcaacctgactgctttgaagatatgatcgcgctggtggccctgttccgtccc
ggcccgttgcagtcagggatggtagataactttatcgaccgtaagcacggtcgtgaagaa
ctctcttacccggacgttcagtggcagcatgaaagcctgaagccggtactggagccgacc
tacggcatcattctgtatcaggaacaggtgatgcagattgcccaggtactttccgggtat
actctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaggagatg
gccaaacagcgttccgtttttgaagagggcgcgaaaaagaacggtatcgacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacgggtttaacaaatcgcac
tccgccgcttatgcgctggtttcttaccagacgctatggctaaaggcgcactatccggct
gaatttatggcggcggtaatgaccgccgatatggacaacaccgagaaggtcgtcggcctg
gtggacgagtgctggcggatgggactgaaaattctgccgccggatattaactccggattg
taccatttccacgttaacgatgagggcgagatcgtctacggtatcggcgcgatcaaaggc
gtcggcgaagggccgatcgaagcgatcatcgacgcgcgtaatcagggcggctatttccgc
gaactgtttgatctgtgcgcgcggaccgacaccaaaaggctcaaccgccgggtgctggaa
aagctgatcatgtccggggcgttcgaccgcctggggccgcaccgcgccgcgctgatgaac
tcattgggcgatgcgctgaaagccgccgaccagcacgccaaagcggaagctatcggtcag
gcggatatgttcggcgtactggcggaagagccggagcaaatcgagcaatcctatgccagc
tgccagccgtggccggagcaggtggtgttagatggggaacgtgaaacgttggggctgtac
ctgacgggccaccccatcaatcagtatttaaaagaaattgagcgctatgtcggcggggta
aggctcaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtg
attgccgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcgtctggaagtgatgttatttaccgacgcgctggataaataccagcag
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagctcgcgaaaaatac
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcgcggctgcgttttggcgcaacgtggcgtgtctctccgagcgat
cgtttacttaacgatctgcgtggcctcattggttcggagcaggtggaactggagtttgac
taa
DBGET
integrated database retrieval system
