Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150: SPA0565
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Entry
SPA0565 CDS
T00219
Symbol
pmrF
Name
(GenBank) putative lipopolysaccharide modification protein
KO
K10012
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:
2.4.2.53
]
Organism
spt
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Pathway
spt00541
Biosynthesis of various nucleotide sugars
spt01100
Metabolic pathways
spt01503
Cationic antimicrobial peptide (CAMP) resistance
Module
spt_M00761
Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N
Brite
KEGG Orthology (KO) [BR:
spt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SPA0565 (pmrF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SPA0565 (pmrF)
Enzymes [BR:
spt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.53 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
SPA0565 (pmrF)
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
AAV76567
UniProt:
Q5PNA5
A0A735JTA4
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All DBs
Position
complement(639195..640178)
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AA seq
327 aa
AA seq
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MFDAAPIKKVSVVIPVYNEQESLPELIRRTTAACESLGKAWEILLIDDGSSDSSAELMVK
ASQEADSHIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADEG
FDVVGTVRQNRQDSLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPIIDTMLRCHER
STFIPILANIFARRATEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTTPLRLLSLLG
SVIAIGGFSLSVLLIVLRLALGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYN
DVRARPRYFVQQVIYPESTSFTEESHQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgccgcccccataaaaaaagtctcggtggttattcctgtctataacgaacag
gaaagcctgccggaattgataagacgcaccaccgccgcctgcgagagtctgggcaaagcg
tgggagattttattgatagatgatggtagcagcgatagctcggcggagctgatggttaag
gcgtcccaggaggccgatagccatatcatctctattttactcaaccgtaactacggtcaa
catgcagcaattatggcggggtttagccatgtaagcggcgatcttatcattacgctggat
gccgatctgcaaaacccgccggaagagatcccacgcctggtggcgaaagccgatgaaggg
ttcgatgtggtaggcaccgtgcgccagaaccgacaggacagcctgtttcgcaaatcggcg
tcaaaaatcattaatctgctgatccagcgcacaacgggcaaagcgatgggcgattacggc
tgcatgttacgcgcctatcgccgccctattatcgataccatgttgcgctgccatgaacgc
agcacctttatccctattctggccaacattttcgctcgtcgggctaccgagatcccggtg
catcacgctgaacgtgaatttggcgactctaaatacagttttatgcgtctcattaacctg
atgtatgacctggtgacctgcctgacgacgacgcctctgcgcctgttgagcctgctgggc
agcgttatcgccatcggcgggtttagcctgtcggtattgcttattgtacttcgcctggcg
ctgggaccgcagtgggcggcggaaggcgtatttatgctctttgccgttctgtttaccttc
atcggcgcgcaattcatcggtatggggctgctgggcgaatacatcggtcgcatttataac
gatgtccgcgcccgcccccgctattttgttcaacaagttatctacccggaaagcacgtcg
tttactgaggaaagtcaccaatga
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