KEGG   Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150: SPA1056
Entry
SPA1056           CDS       T00219                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
spt  Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Brite
KEGG Orthology (KO) [BR:spt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spt03016]
    SPA1056 (rnd)
Enzymes [BR:spt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SPA1056 (rnd)
Transfer RNA biogenesis [BR:spt03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SPA1056 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: AAV77027
UniProt: A0A0H2WNI7
LinkDB
Position
1126999..1128114
AA seq 371 aa
MIETDDALASLCEAVRTCPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISDWS
PLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFASMVEE
YTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECR
LMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDMAVNFVVREENL
WAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVAKAQALPEEALPEPLLNLMDMPGYR
KAFKAIKALVAEVSASHHVSGELLASRRQINQLLNWHWKLKPQNGQPELISGWRAELMAE
KLTLLLQEYPR
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgattgaaacggacgatgcgctggcgagcctgtgtgaagctgtccgcacatgtccggct
attgctttagatacggaatttgtccgtacccgcacctattacccgcagttaggattgatc
cagttatttgacggggcaaatgtcgccctgatcgatccgctcggcatcagcgactggtcg
ccgttaaaagcggtgctgcgcgatacgggaatcaccaaatttctgcacgcgggtagcgaa
gatctggaagtatttctgaatgcgtttggcgaactgccggaacccctgattgatacgcaa
attctggcggcgttttgcgggcgtccgctgtcgtggggttttgcgtcgatggtagaagag
tatacgggcgtggcgctggacaaaagcgagtctcgtaccgactggttagcccggccttta
agcgaacgtcagtgtgaatacgcggcggcggatgtctggtatctgttaccgatcgccaaa
aagctgatgattgaaactgaagccgcagggtggctgcctgccgcgcttgatgaatgccga
ttgatgcagcagcgtcgtcaggagattcaggcgccggaagaagcatggcgggatatcacc
aatgcctggcaactgcgtactcgccagttagcctgtctgcaacttttagctgactggcgg
ctacgtaaggcgcgtgagcgcgatatggcggtgaactttgttgtgcgtgaagaaaacctg
tgggcggtcgcgcgttatatgccgggcagtctcggtgagctggatagcctggggctttcc
ggcagcgagattcgttttcacggcaagacgttgatatcgctggtggcgaaagcacaggcg
ctaccggaagaggcattgccggaacccctgttgaatctgatggacatgccgggctatcgc
aaagcgtttaaggccatcaaagcgctggtggcggaggtgagcgcgtcgcatcacgtcagc
ggcgagctactggcatcgcgtcggcagattaatcagttgcttaactggcactggaaatta
aaaccgcaaaatgggcaaccggaattgatttccggctggcgcgccgaactgatggcggag
aagttaactcttctgttgcaggagtatccgcgttaa

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