Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150: SPA3840
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Entry
SPA3840 CDS
T00219
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spt
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Pathway
spt03030
DNA replication
spt03410
Base excision repair
spt03420
Nucleotide excision repair
spt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPA3840 (polA)
03410 Base excision repair
SPA3840 (polA)
03420 Nucleotide excision repair
SPA3840 (polA)
03440 Homologous recombination
SPA3840 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spt03032
]
SPA3840 (polA)
03400 DNA repair and recombination proteins [BR:
spt03400
]
SPA3840 (polA)
Enzymes [BR:
spt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPA3840 (polA)
DNA replication proteins [BR:
spt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPA3840 (polA)
DNA repair and recombination proteins [BR:
spt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SPA3840 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPA3840 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AAV79609
UniProt:
A0A0H2WUJ9
LinkDB
All DBs
Position
3984210..3986996
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNK
DVAYLSYKLATIKTDVELELTCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAK
GAKPAAKPQETVVIDESPSEPAAALSYENYVTILDDVTLESWIEKLKKAPVFAFDTETDS
LDNIAANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRQRALELLKPLLEDEKVRKVGQN
LKYDRGVLQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEDIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV
ERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDLDAVAKRI
HQLMENCTRIDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttattctcgtagatggctcatcctatctctatcgc
gcctatcatgcgtttccgccgttaaccaacagcgcgggagaacctacgggcgcaatgtat
ggtgtcctcaacatgttgcgcagcctgatcatgcagtatcagccgacgcatgctgcggtg
gtgtttgacgccaaaggaaaaaccttccgtgacgagctctttgaacactacaaatcgcat
cgtcctccgatgccggatgatctgcgtgcgcaaatagagccgttacatgccatggttaaa
gccatggggttacctctgctggcggtctctggcgtagaagcggatgacgttatcggtaca
ctggcgcgagaagcggagaaggtggggcgtccggtattaatcagcaccggcgataaagat
atggcacagttggtgacgccgaatattacgctgatcaacaccatgactaacaccatcctc
ggcccggatgaagtcgttaataagtacggcgtgccgcctgagctgattatcgactttctg
gcgctgatgggggactcctcggataatattccaggcgtaccaggcgtgggtgagaagacg
gcgcaagctttgcttcagggattgggcggcctggatacgctgtacgccgagccggaaaaa
attgccggtctcactttccgcggcgccaaaacgatggccggtaaattagcgcagaataaa
gacgtagcgtacctgtcttataaactcgccaccattaaaacggatgttgaactggagctg
acctgcgaacagcttgaagtgcagcagccgattgcggatgaactgctgggcctgtttaaa
aaatatgagtttaagcgctggacggcggacgttgagtcaggcaagtggctacaggcaaag
ggcgcgaaaccggcggccaaaccgcaggaaacggtcgttattgatgaatcgcccagcgaa
ccggcagcggcgctctcttatgaaaattatgtcacgattctggacgacgttacgctggaa
agctggattgaaaagctgaaaaaagcgccagtttttgctttcgacacggagaccgacagt
ctggataatatcgccgccaacctggtgggcctctcgtttgctatcgaacctggcgttgcc
gcgtatgtacctgtcgcgcatgattatctggacgctccggatcaaatctcccgccagcgt
gctctggaactgctgaagccgctgctggaagatgaaaaagtgcgcaaagtggggcaaaac
ctcaagtacgatcgcggcgtcttgcaaaattacggtattgagctgcgcggtatcgccttc
gataccatgcttgagtcttacattctgaacagcgtcgccggacgccatgatatggacagt
ttgtccgatcgttggctgaagcacaaaactatcacctttgaagacattgccggtaaaggt
aaaaaccagctcacctttaaccagatcgcactggaggaagcggggcgctatgcggcagaa
gatgcggatgtcacattacagttgcatctcaaaatgtggccagagctccagcagcacaaa
ggcccgctgaatgttttcgaaaacatcgaaatgccgctggtgccggtactgtcacgcgtt
gagcgcaatggcgtaaaaatcgatcctgccgtcctgcacaaacattcggaagaaatcaca
ctacgtctggcggaactggaaaagaaagcgcatgacattgcgggcgaggcgttcaacctg
tcctcgacgaagcagttgcagaccatcctgtttgaaaagcagggtattaagccgctgaag
aaaacgcctggcggcgcgccgtcaacgtcggaagaggtgctggaagagctggcgctggac
tatccgctgccgaaagtgattctggagtatcgtggtctggcgaagctaaaatccacctat
accgataagctgccgctgatgattaacccgaaaaccgggcgcgtccatacgtcctatcat
caggcggtaacggcgacgggacgtttatcgtccaccgatccgaacctgcaaaatattccg
gtgcgcaatgaagagggccgccgcattcgtcaggcatttattgcgcctgaggattatctc
atcgtgtctgcggactattcacagattgagctgcgtattatggcgcatctttcccgtgat
aaagggctgctcacggcgttcgccgaagggaaagatattcaccgcgcaacggcggcggaa
gtctttggcttgccgctggatagcgtgaccggggaacagcgccgaagtgcgaaagccatt
aactttggcctgatttacgggatgagcgccttcggtctttctcgccagcttaatattccg
cgtaaagaggcgcagaagtatatggatctctacttcgaacgctaccctggcgtgctggaa
tatatggagcgcacccgcgctcaggcaaaagaacaaggctatgtggaaactctggagggg
cgccgcctttacctgccggatattaaatccagcaacgcggcgcggcgcgcgggggcggaa
cgcgcggcgatcaatgctcccatgcaaggaacggctgccgatatcatcaagcgcgccatg
attgccgtcgatgcctggctacaggccgagcagccgcgcgtgcggatgattatgcaggta
cacgatgaattagtgttcgaggtgcataaagacgacttagatgcggtagcaaaacgtatc
catcagttgatggaaaactgcacgcgtattgatgtgccgttgctggtggaagtcggtagc
ggagaaaattgggatcaagcgcactaa
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