Sphingobium sp. TA15: Sj15T_02200
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Entry
Sj15T_02200 CDS
T11324
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spta03400
]
Sj15T_02200 (radA)
DNA repair and recombination proteins [BR:
spta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sj15T_02200 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
AAA_16
DnaB_C
AAA_22
RecA_N
nSTAND_NTPase5
AAA
AAA_30
NACHT
Glyco_hydro2_C5
NTPase_1
nSTAND3
AAA_5
Rad51
MeaB
AAA_24
SLFN-g3_helicase
AAA_29
AAA_14
NPHP3_N
ATPase_2
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
BDD65199
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Position
1:222621..223988
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AA seq
455 aa
AA seq
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MAKAKRKFVCQQCGTVSGRWQGQCDDCGEWNSIVEETAETVFSARHDLHSGGRALMLVGL
DDKVDLPPRTTTGIAEFDRALGGGIVSGSATLIGGDPGIGKSTLLLQAAARIASAGHSVA
YISGEEASDQVRLRAQRLGLGNAPVQLASATSVRDILTTLGEGAPPALLIIDSIQTMHSD
LIEGAPGTVSQVRASSQELIRFAKQRGTALILVGHVTKDGSIAGPRVLEHMVDTVLSFEG
ERSHQYRILRAIKNRFGGTDEIGVFAMVAEGLEEVANPSALFLTHRDENVTGATVFPALE
GTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMVLAVLEARCGLSFSTCEVYLNVAG
GYRLSDPAADLAVAAALMSALSERPVPADVVLFGEIALSGEIRPVAHAPLRLREAAKLGF
NRAFVPATVADGVKGISVSGYRALAQLVDQMLGRG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaagcgcaaattcgtctgtcagcaatgcggcaccgtttccggccggtgg
caggggcagtgcgacgattgcggcgaatggaacagcatcgtcgaggaaacggcggagacg
gtcttttccgcccgccatgacctgcatagcgggggcagggcgctgatgctggtggggctg
gacgacaaggtggatctgccgccgcgcaccacgaccgggatcgcggagttcgaccgggcg
ctgggcggcgggatcgtttccggttcggccacgctgatcggcggcgatccgggcatcggc
aagtcgacgctgctgttgcaggcggccgcccgcatcgcttcggccgggcacagcgtcgcc
tatatcagcggcgaggaggcgtcggaccaggtccggctgcgcgcccagcgcctgggcctg
ggcaatgcgccggtgcagcttgccagcgccacttcggtgcgggacatattgacgactttg
ggggagggggcgccgcccgcgctgctgatcatcgattcgatccagacgatgcacagcgac
ctgatcgagggcgcgccgggcacggtcagccaggtgcgcgcctccagccaggaactgatc
cgcttcgccaagcagcgcggcaccgcgctgatcctggtcggccatgtgaccaaggacggc
agcatcgccggtccccgcgtgctggagcatatggtcgacacggtgttgagcttcgagggc
gagcgcagccatcaatatcgtatcctgcgcgccatcaagaaccgctttggcggcacggac
gagatcggggtgtttgccatggtggcggaagggctggaggaggtcgccaatccttccgcg
ctgttcctcacccatcgcgacgagaatgtgaccggcgcgaccgtgtttcccgcgctggag
gggacgcgaccggtgctggtggagattcaggcgctggtggtgaggctttccagtggcgcg
accccccgccgcgccgtggtggggtgggacagcgggcggcttgccatggtgctggccgtg
ctggaggcgcgctgcggcctcagcttctcgacctgcgaagtctatctgaacgtcgcgggc
ggctatcgcctgtcggacccggcagccgaccttgccgtcgccgccgcgctgatgtccgcg
ctttccgaacgcccggtgccggccgatgtcgtcctcttcggggaaatcgcgctgtcgggg
gaaatccgcccggtggcgcatgccccgctgcggctgcgggaagccgccaagctgggtttc
aaccgcgccttcgtccccgccaccgtggcggacggggtcaagggcatttcggtcagcggc
tatcgcgcccttgcgcaacttgttgaccagatgcttgggcgcggatag
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