Sphingobium sp. TA15: Sj15T_04490
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Entry
Sj15T_04490 CDS
T11324
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
spta Sphingobium sp. TA15
Pathway
spta03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Sj15T_04490 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spta03400
]
Sj15T_04490 (ku)
DNA repair and recombination proteins [BR:
spta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Sj15T_04490 (ku)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Imm61
Motif
Other DBs
NCBI-ProteinID:
BDD65428
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All DBs
Position
1:437861..438733
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AA seq
290 aa
AA seq
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MAARAYWQGQIRLALVSIPVEIYAATKSGAQIAFHQIHQPSGKRVRYEKTVPGIGPVDPE
DIVKGYELSKGDYVLLQPDEIEAVKLESKKTLELTQFVDASEIDVLYYERPYYVVPADDL
AEEAFIVLREALRRTRKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNRAQSYFR
DIEDAKPDAELLDLAETLIEKKTAPFKPDSFHDRYVDALERLIEKKKKSKGRRIIEEEEE
GTVARGSNVIDLMAALKKSVGSGTAASGSKPAAKKAPAKTPAKPASRKRA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcgcgcatattggcaggggcagattcgtctggcgctggtatccattccggtg
gaaatctatgccgccaccaagtcaggcgcgcagatcgcctttcaccagatccaccagccc
agcgggaagcgcgtccgttatgaaaagaccgtccccggcatcggtccggtcgatcctgag
gacatcgtcaagggctatgaactgtccaagggcgactatgtgctgctccagcccgacgag
atcgaggcggtgaagctggaaagcaagaagacgctcgaactcacccagttcgtcgacgcc
agcgagatcgatgtcctttattatgagcgaccctattatgtcgtgcccgccgacgatctg
gcggaggaggcctttatcgtcctgcgggaggcgctgaggcggacgaggaaggtcggcctg
ggccaactcgccatgcggggccgggaatatgtcgtgtcgctgaagccctgcggccggggc
atggtgctggaaacgctgcgctacgccgatgaggtgaaccgcgcccaaagctatttccgg
gacatagaggatgcgaagcccgatgcggaactgctcgacctggcggagacgctgatcgag
aagaagaccgcgcccttcaagcccgacagcttccacgaccgctatgtggatgcgctggag
cgcttgatcgaaaagaagaagaagtcgaagggccgccggatcatcgaggaggaagaggag
ggcacggtcgcgcgcggcagcaatgtgatcgacctgatggcggcgctcaagaaatcggtc
ggctccggcacggctgcatccggctcgaaaccggccgcgaagaaagcacccgccaagacg
cccgccaagccggccagtcgaaaacgggcctga
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