Sphingobium sp. TA15: Sj15T_04550
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Entry
Sj15T_04550 CDS
T11324
Symbol
putR_1
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spta03000
]
Sj15T_04550 (putR_1)
03036 Chromosome and associated proteins [BR:
spta03036
]
Sj15T_04550 (putR_1)
Transcription factors [BR:
spta03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Sj15T_04550 (putR_1)
Chromosome and associated proteins [BR:
spta03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Sj15T_04550 (putR_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
TrmB
HTH_20
HTH_5
MarR_2
DUF977
HTH_IclR
HTH_9
HTH_Crp_2
NirdL-like_HTH
AsnC_trans_reg_3
HTH_7
DnaD_N
DUF7343
Motif
Other DBs
NCBI-ProteinID:
BDD65434
LinkDB
All DBs
Position
1:complement(445119..445610)
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AA seq
163 aa
AA seq
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MKNPPTIEMDEFDRKIVAALIEDGRMTVTDLAQAVGLSKTPCQVRLRRLIETGVIRGFRA
IVDPAKLGMDHVAFAEVKLSDTREKALDEFNAAVRRIPEVEECHMIASSFDYLLKVRTAD
IRRYRAVLGEKISSLPHVASTSTYVAMETVLDASGHPRAKSRN
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatccgccgacgatcgagatggacgaattcgaccggaagatcgtcgccgccctc
atagaggacggccgcatgacggtcaccgacctggcccaggcggtgggcctgtccaagacg
ccctgccaggtccgcctgcgccgcctcatcgaaacgggggtgatccggggatttcgggcg
atcgtcgatccggcgaagctgggcatggaccatgtcgccttcgccgaggtgaagctgtcc
gacacgcgcgaaaaggcgctggacgagttcaacgccgccgtccgccgcattcccgaggtc
gaggaatgccatatgatcgccagcagcttcgattatctgctgaaggtgaggacggccgac
atccgccgttaccgcgccgtgctgggggagaagatctccagcctgccccatgtcgccagc
acctccacctatgtcgcgatggaaaccgtgctggacgcgagcggccatccccgcgccaag
agccgtaattga
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