Sphingobium sp. TA15: Sj15T_06320
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Entry
Sj15T_06320 CDS
T11324
Symbol
papS
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spta Sphingobium sp. TA15
Pathway
spta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sj15T_06320 (papS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spta03019
]
Sj15T_06320 (papS)
Enzymes [BR:
spta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Sj15T_06320 (papS)
Messenger RNA biogenesis [BR:
spta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Sj15T_06320 (papS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
EspB_PE
Motif
Other DBs
NCBI-ProteinID:
BDD65611
LinkDB
All DBs
Position
1:complement(642970..644178)
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AA seq
402 aa
AA seq
DB search
MTSLLPDADWRHRPGLDALLRALGAEQGLARFVGGAVRDGLLGLPVNDLDIATVLEPQSV
IDRLKAAGIKAVPTGIDHGTITAVINGWPVEITTLRRDVSTDGRRATIAYTDDWRKDAAR
RDFTINALYADPLTHAITDFFGGVADLRAHRVRFIGDAGARIAEDHLRILRYFRFLARFG
HDEPDDEAYAACREAANSLMALSRERIADELLKLLALPRPLASLRLMVDGGILLPVLPEV
DHGGLARLSALIDREAASGTAPAALRRLAALLPPDPRVADQVGARLKLSNKARKRLATAL
EGAASAPPRALAFRIGVEGAIDRMLIDPSAPLNDMKLLVGWTPPRLPLGGGALIERGLQP
GPDVAKALAEVQDIWVAEGFPDEARLSEIADQTVSKFQRARQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcctgctgcctgacgccgactggcgccaccgccccggcctggacgcgctgctg
agggcgcttggcgcggaacagggcctcgcccgcttcgtcggcggcgcggtgcgcgacggc
cttctgggcctgccggtcaacgacctggacatcgccaccgtgctggagccgcaatccgtc
atcgaccgcctcaaggccgccggcataaaggccgtgcccaccggcatcgaccatggcacg
atcacggcggtgatcaacggctggccggtggagatcacgaccctgcgccgcgacgtcagc
acggacggccgccgcgccaccatcgcctataccgacgactggcgcaaagacgccgcccgg
cgcgattttaccatcaacgcgctctatgccgacccgctgacccacgccatcacggacttc
ttcggcggcgtcgccgaccttcgcgcgcatcgcgtccgcttcatcggcgacgccggcgcc
cgcatcgcggaggatcatctgcgcatcctgcgctatttccgcttcctcgcccgcttcggc
catgacgaacccgatgatgaggcctatgccgcctgccgggaggccgccaacagcctgatg
gccctctcccgcgaacgcatagcggacgagctgctcaagctgctcgccctgccccgcccg
ctggcctcgctccggctcatggtcgacggcggcatattgctgcccgtccttccggaggtc
gaccatggcgggctggcccgcctgtccgcgctgatcgatcgcgaggccgcctccggcacc
gccccggcggccctgcgccgcctggcggccctgcttcccccggacccccgcgtcgccgac
caggtcggcgcccggctcaaattgtccaacaaggcccgaaagcgcctggccaccgcgctg
gagggcgcagcctccgctccgccccgcgccctcgccttccggatcggcgtggaaggggcc
atcgaccgcatgctgatcgatccatcggcgccgctcaacgacatgaagctgctcgtagga
tggacgccgccgcgcctgccgctgggcggcggcgccctgatcgagcggggcctgcaaccc
ggcccggacgtggcgaaggcgctggcggaagttcaggacatctgggtggcggagggcttt
cccgacgaagcccgcctgtcggaaatcgcggatcagaccgtttcgaagttccagcgcgcc
cgccaatag
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