Sphingobium sp. TA15: Sj15T_06880
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Entry
Sj15T_06880 CDS
T11324
Name
(GenBank) hypothetical protein
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spta03009
]
Sj15T_06880
Enzymes [BR:
spta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Sj15T_06880
Ribosome biogenesis [BR:
spta03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sj15T_06880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BDD65667
LinkDB
All DBs
Position
1:699485..700795
Genome browser
AA seq
436 aa
AA seq
DB search
MKGRPPGKSSGPRKSGTAPAGRARGAVKAARARKPDAPKAGPRPPAAKPAAKPAAAKPAK
PSPAKGVSLDVRQFRVGADDDGIRLDRWFQRHLPDVGFNTVSRWARTGQLRVDGARAAPG
DRIAEGQSIRVPPAEPKAPETAKPRRVRPQLTDDQMAFAQGLVIHRDAQAIVINKPPGLA
TQGGTKTDDHVDGLLDALEFDLDQRPKLVHRLDKDTSGALLIARTARSAAYFAKAFSSRT
ARKVYWAIVMGVPSIEDGMIELPIAKQPGTGGEKMHVDEEEGLPSRSRYRVIERAGNRAA
WVELQPYTGRTHQLRVHMAAIGHPIVGDGKYGGKDAFLSGTISRKMHLHARRIRVDHPDG
GPVDVRAELPEHFAASLASLGFDLSAGDLPLDEEIARPPTREDEKKAARAHAKQIRKGRK
GERRARGSGGGARGKS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggcgtcctcccggcaaatcttccggcccgcgcaagtccggcaccgctcctgcg
ggtcgtgcgcggggggcggtcaaggccgctcgcgcccgcaagcccgatgcgcccaaggcc
ggtcccaggccgcctgccgcgaaacctgccgcaaaacccgcagccgcgaagccggccaag
ccgtccccagccaagggcgtttcgctggatgtccggcagttccgcgtcggcgcggatgac
gacggcattcggctcgaccgctggttccagcggcatctgcccgatgttggcttcaacacc
gtctcccgctgggcgcgcaccggccagttgcgcgtcgatggcgcccgcgccgcgccgggc
gaccgcatcgccgagggccagagcatccgcgtgccccccgccgaacccaaggcgcccgaa
accgcgaagcccaggcgcgtccgcccgcaactgaccgacgatcagatggccttcgcccag
ggactcgtcatccatcgcgacgcgcaggccatcgtcatcaacaagccgcctggcctcgcc
acccagggcggcaccaagacggacgatcatgtcgacggcctgctcgatgcgctggagttc
gacctggaccagcggcccaagctcgtccaccggctggacaaggacacgtccggcgcgctg
ctgatcgctcgcaccgcccggtcggccgcctatttcgccaaggccttttccagccgcacg
gcgcgcaaggtctattgggccatcgtgatgggcgtgccctccatcgaggacggcatgatc
gaactgcccatcgccaagcagcccggcaccggcggcgagaagatgcatgtggatgaggag
gaagggctgccctcccgctcgcgctatcgcgtgatcgagcgggcgggcaaccgcgccgcc
tgggtggagctgcaaccctataccggccgcacccaccagttgcgcgtccatatggcggcc
atcggccatcccatcgtcggcgacggcaaatatggcggcaaggacgcctttctgagcggc
acgatcagccgcaagatgcaccttcacgcccggcgcatccgggtcgatcatcccgatggc
ggcccggtcgacgtgcgggccgaactgccggagcatttcgccgccagccttgcctcgctg
ggcttcgacctgtccgccggcgacctgccgctggacgaggagatcgcccgcccgcccacg
cgggaggatgagaagaaggccgcccgcgcccatgccaagcagatccgcaagggccgcaag
ggcgaaaggcgcgcgcgcggctccggcgggggagcgcgcgggaagtcatga
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