Sphingobium sp. TA15: Sj15T_08590
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Entry
Sj15T_08590 CDS
T11324
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Sj15T_08590 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spta03019
]
Sj15T_08590 (rnc)
03009 Ribosome biogenesis [BR:
spta03009
]
Sj15T_08590 (rnc)
03036 Chromosome and associated proteins [BR:
spta03036
]
Sj15T_08590 (rnc)
Enzymes [BR:
spta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Sj15T_08590 (rnc)
Messenger RNA biogenesis [BR:
spta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sj15T_08590 (rnc)
Ribosome biogenesis [BR:
spta03009
]
Eukaryotic type
90S particles
RNase
Sj15T_08590 (rnc)
Prokaryotic type
rRNA processing factors
Sj15T_08590 (rnc)
Chromosome and associated proteins [BR:
spta03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Sj15T_08590 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDD65838
LinkDB
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Position
1:880596..881267
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AA seq
223 aa
AA seq
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MTKADTEGWLKALIGHAPKDRTAFHQALTHGSAHAVNYERLEFLGDRILGLLIAEWVYDR
FSGEPEGKLSRRFNALVSGETCAEVARGAGVPAHLILGKQARDDGAADSDNVLGDVMEAL
IGALYLEGGLEEARTLVRRLWADRVDTQASAPKHPKSALQEWAAANKRKPPEYAMTDRSG
PHHALKFTVTVSIKGAGEASATGGSKQEAETAAAKALLDKLTA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaaagcggacaccgaaggctggctgaaggccctgatcggccacgcgccgaaggac
cggacggccttccatcaagcgctgacccatggcagcgcccatgcggtgaactatgaacgg
ctggagttcctgggcgaccgcatcctcggcctgctgatcgccgaatgggtctatgaccgc
ttttcgggcgaaccggaaggcaagctctcccgccgcttcaacgcgctggtgtcgggcgag
acctgcgccgaagtcgcccgcggcgccggggttccggcgcatctcatcctcgggaagcag
gcccgcgacgatggcgccgccgacagcgacaatgtgctgggcgacgtgatggaggcgctg
atcggcgcgctctatctggagggcgggctggaggaggcccgcaccctggtccgccgcctc
tgggccgaccgcgtcgacacccaggccagcgcgcccaagcatcccaaatccgccctccag
gaatgggccgccgccaacaagcgcaagcccccggaatatgcgatgaccgaccgctccgga
ccccaccacgccctgaaattcacggtaacggtcagcatcaagggcgcaggcgaagcaagc
gcgacgggcggctccaaacaggaagccgaaaccgcagcggcaaaggcattgctggacaaa
ctgaccgcgtaa
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