Sphingobium sp. TA15: Sj15T_09030
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Entry
Sj15T_09030 CDS
T11324
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spta03400
]
Sj15T_09030
Enzymes [BR:
spta01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Sj15T_09030
DNA repair and recombination proteins [BR:
spta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Sj15T_09030
Prokaryotic type
Sj15T_09030
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDD65882
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Position
1:complement(929642..931048)
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AA seq
468 aa
AA seq
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MSDPVLLWFRQDLRLADQAALGAAVQEGPVIPLYVLDDQAPRQWKMGGASRWWLHHSLRS
LDDDLRKKGSRLVLRQGNCVDQIVQIAEETGARRVHALHHYEPWWRNAEKALGKRLDLCL
HDGALLLPPGAVRTGGGNSYRIYTPFARAVMDHMPPAEPVRAPSRIDAPGQWPKGDSLDR
WGLLPTAPDWAAAFSRDWTPGEAGARANVAAFLDEAADYDRARNLPSREGSSRLSPHLHF
GEVSPAQVWRQVAGAPGNATTFLKELIWRDYAHTQIWAMPAYGSENARPAFDAMPWRDLR
EAGVDFTAWKTGRTGYPIVDAGMRQLWTTGWMHNRVRMIAASFLIKHLLIDWRHGARWFW
DTLVDASYANNSVNWQWVAGSGVDANIFSRIMAPLTQSEKFEAADYIRKWVPELAHLNDD
VIHDPEAHDARPADYPAKCIDHREGRERALAAWRRISHDCGAINHRAG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccccgtactcctctggtttcgccaggatctgcgccttgccgatcaggccgcg
ctgggcgccgccgtgcaggaagggccggtgatccccctctatgtgctggacgatcaggcg
ccgcgccaatggaagatgggcggggcctcgcgctggtggctgcaccacagcctcaggagc
ctggacgacgatcttcggaagaagggatcgcgcctggtgctgaggcagggaaactgcgtc
gaccagatcgtccagatcgccgaggaaacgggcgcgaggcgcgttcacgcgctgcatcat
tacgaaccctggtggcgcaatgcggaaaaggcgcttggcaagaggctggacctttgcctg
catgacggcgcgttgttgctgccgcccggcgcggtgcggacgggcggaggaaacagctat
aggatctacacgcccttcgcccgcgccgttatggatcatatgccgccggccgagccggtc
cgcgccccttcgcgcatcgacgcgccggggcaatggccgaagggcgattcgctggatcgg
tgggggcttttgccgaccgcgccggattgggcggcggccttttcccgcgactggactccg
ggggaggcgggggctcgggccaacgtcgccgcctttctggacgaggcggccgactatgac
agggccaggaacctgccgtcgcgggagggaagctctcgcctgtcgccgcaccttcatttc
ggggaggtttccccggcccaggtctggcgccaggtcgccggagcgcccggcaacgcgacg
accttcctcaaggaactgatctggcgcgactatgcccatacgcagatatgggccatgcct
gcctatggatcggaaaatgcgcggccggccttcgacgccatgccctggcgcgaccttcgc
gaggcaggggtcgatttcacggcgtggaagaccgggcgcacgggctatcccatcgtcgat
gccggcatgcggcagctctggacgacgggctggatgcacaatcgggtgcgcatgatcgcg
gccagcttcctgatcaagcatctgctgatcgattggcggcatggggcgcgctggttctgg
gatacgctggtcgatgcgagctacgccaataacagcgtcaactggcaatgggtcgcgggc
agcggcgtggatgccaatatcttctcgcggatcatggcgcccctgacccagtcggaaaag
ttcgaggccgccgactatatccggaaatgggtgccggaactggcgcatctgaacgacgac
gtcatccacgaccccgaagcgcacgacgcgcgcccggccgattatccggccaagtgcatc
gaccatcgggaaggtcgggaacgggctctcgccgcgtggcgccggataagccatgattgc
ggcgcgataaaccatcgggcaggatga
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