Sphingobium sp. TA15: Sj15T_10180
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Entry
Sj15T_10180 CDS
T11324
Name
(GenBank) hypothetical protein
KO
K26273
protein strawberry notch
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spta03036
]
Sj15T_10180
Chromosome and associated proteins [BR:
spta03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Sj15T_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
DEAD
AAA
Motif
Other DBs
NCBI-ProteinID:
BDD65997
LinkDB
All DBs
Position
1:complement(1039692..1042721)
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AA seq
1009 aa
AA seq
DB search
MASILPPTPTYRPMLPSSAIRALSDAQLETVIHAGQAFERMLPGRFKANEAGTLLVEQDD
GAEYRQGFFLGDGTGAGKGRQVAAIMLDQWSQGRRKAVWVSRSSALIEDARRDHCALGGL
PLDIQPLDAFAPGTSITMDTGILFVTYATLRSQRHDQQSRLQQILAWLGSDHDGVIVFDE
AHAMANAAGTETKFGTQKGSEQGLAGVRLQNLLPKARILYVSATGATDIANLCYASRLGL
WGPGTAFGSRDVFMSQMTEGGVAALELVARDLKALGLYTARALSFAGVEYDMLVHQLSAD
QIAVYDAYADAWAVIHAGLEAVLEATGIVDRMGGRTLNAHAKGSALSRFESQKQRFFAST
LLAMKLPTVIQEIEKEIDAGHSAVVQLVTTSEALLNRRLADLSPEERAELDIQLSPTQTM
IDYLMNAFPTRQMQVFTDENGNPYSEPMTDEDGNPVHSKEAIDRRDALIEQLCVLPEIGS
ALDEIIAHFGTAQVAEVTGRSKRLVRDRDGRQRLETRSARSNLGETAAFTDGSKRILVFS
DAGGTGRSYHADRDSRSAGYRRIHFLLEPGWRAAEAIQGLGRSNRTNQASAPVFRPCTTN
CRGERRFISTIARRLDSLGAITRGQRQTGGQNMFDPADNLESEYALEALRQWYQMLHAGK
LQSVSLGDFCRMTALKLVDKDSGELVENLPPIQRWLNRLLALRISVQDAIFTEYLALIEA
RVEAAREAGTLDVGVETIMTERLVELDSTVLRTDPHSGAETRLVHLELHRRRHALSYAAL
MRDWSDVPDALPVRNSRSGRIALRVPTWPDMDDDGKFRTAWRLQRPTGSERIGGAEFAKS
HWEFCDSETFETLWHEEVAEAQSKIDVETIHLATGLLLPIWHKLPDRSMEVWRIADKAGN
GLLGRIVAAADVARMADQLGIEIAVTLSVQEILAAARRPDGIVIPALGKARLIRSRVNGQ
QRYELKEFDAARLPLYKSRGAFTEVVQYRTRLFIPVDQADEVIARLIAD
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcatctatcctgccgcccacgcccacctatcgtccgatgcttccgtccagtgccatc
cgcgccctgtcggatgcgcagctcgagacggttatccatgccggccaggcgttcgagcgc
atgcttccggggcgcttcaaggccaatgaagcaggcacactcctcgtagagcaggatgac
ggggccgaatatcgacagggcttcttcctcggggacgggacgggcgccggcaagggacgg
caggttgcggccatcatgctcgaccagtggagccagggacgtcgcaaggccgtctgggtg
agccggtcttcagcactgatcgaagatgcccgccgggaccattgcgcgctgggcggcctt
ccgctcgacatccagccgctggacgccttcgctcccggcacatcgatcacgatggacacc
ggtatcctttttgtaacctacgccacattgcgatcccaacggcacgatcaacagtcgcgc
ctacagcagatcctggcgtggcttggatccgaccatgacggtgtgatcgtctttgacgaa
gcccatgccatggcaaacgctgccgggaccgagacgaagttcggcacccagaaaggctcc
gaacaggggttggccggggtgcgcctgcagaacctccttcccaaggcgcggatcctctac
gtctccgccaccggggcgaccgacatcgccaatctctgctacgcgagccgcctgggcctc
tggggccctgggaccgcctttggtagccgcgatgtcttcatgtcccagatgaccgaaggc
ggtgtggccgctctcgagctcgttgcccgcgacctgaaggcgctcggcctctatactgcc
cgcgcgctctcctttgcgggcgttgaatatgacatgctggttcaccagctttcggccgac
cagattgccgtttatgatgcttatgccgatgcgtgggccgtgattcatgccggcttggaa
gcggtcctcgaggccaccggcatcgtcgatcgcatgggtgggcggacgctcaacgcgcat
gcaaagggctccgctctcagtcgcttcgagagccaaaagcagcggtttttcgcaagcacg
ctcctggcgatgaaacttcctaccgtaatccaggaaatcgaaaaggagattgatgccggg
cacagcgctgtcgtgcagttggtgacgacatccgaggcactgctcaatcggcgccttgcc
gacctttcgcccgaagagcgcgcggagctcgatatccagctttctccgacccagaccatg
atcgattatctcatgaatgccttcccgacccggcagatgcaggtgtttaccgacgagaat
ggcaatccgtactcggaaccgatgaccgatgaggatggcaatccggtccacagcaaggag
gcaatcgaccgacgcgacgcactgatagagcagctttgcgtgctgccggagatcgggtct
gcgctcgatgagatcattgcgcattttggaacagcccaggttgccgaggtgacgggccgc
tcgaagcgacttgtccgcgaccgcgatggtcggcagcggttggaaacacgcagcgcgcgc
agcaatctaggcgaaacggcggccttcaccgatggttcgaaaaggattttggtcttttct
gacgccggcggcacggggcgaagctatcacgccgaccgcgacagccgcagtgcgggctat
cggcgcatccacttcttgctggaacctggctggcgagcggccgaagcgatccagggcctc
ggacggtcgaaccggaccaaccaggcctccgcgcccgtgttccggccctgcacaacaaat
tgccgcggcgagcggcggttcatctcgaccatcgctcgcaggctcgacagcctcggtgcg
atcacgcgcgggcagcggcagactggcggccagaacatgttcgatcctgccgacaatctc
gagagcgaatatgctctggaggcgctgcgccaatggtatcaaatgctccacgccggcaag
ctccagagcgtcagtcttggcgacttttgccggatgaccgccctgaaacttgtcgacaag
gacagtggcgaacttgtcgagaacctgccgcccatccagcgctggctgaaccgccttctt
gcactgcgcatttcggtccaggacgcgatcttcaccgaatatctggctctcatcgaggcc
cgtgtcgaggcagcccgcgaggctggtacactcgatgtgggcgtcgagacgatcatgacc
gaacgcctggtcgaactggactcgaccgtgctgcgaaccgatccccacagcggcgcggaa
acccgccttgttcatctcgaactgcaccgaaggcgccatgcgctcagctacgcggcgctg
atgcgggactggagcgatgtgcccgatgcgctaccagtgcgaaacagccgttccgggcgc
atagcattgcgcgtgccaacctggccggacatggacgatgacggcaaattcagaacggca
tggcggctacagcggccgactggatcggaacggatcggtggggcggagttcgcaaagagc
cattgggagttttgcgacagcgagactttcgagacgctctggcacgaggaggttgcagaa
gcgcagtcaaaaatcgacgtcgaaaccatccatcttgcgaccggcctcctgcttccgatc
tggcacaagctgccggaccggtcgatggaggtctggcggatcgccgacaaggccggcaac
ggcttgctgggacgcatcgtggccgcggccgacgtcgcacgcatggcggaccagcttggt
atcgaaatagccgttacgctgtccgttcaggaaatcctggcggccgcccggcgaccggac
gggatcgtcatcccggcgctcggcaaggcgaggttgatccgaagccgggtcaatggccag
caacgctacgaactcaaggagttcgatgccgccaggcttccgctttacaagtcgcgcggc
gccttcacggaggtcgtgcagtatcggacgaggctcttcatcccggtcgaccaggcggac
gaggtgatcgcccggctgatcgccgactga
DBGET
integrated database retrieval system