Sphingobium sp. TA15: Sj15T_11820
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Entry
Sj15T_11820 CDS
T11324
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spta02000
]
Sj15T_11820
Transporters [BR:
spta02000
]
Other transporters
Pores ion channels [TC:
1
]
Sj15T_11820
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BDD66161
LinkDB
All DBs
Position
1:complement(1186929..1188899)
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AA seq
656 aa
AA seq
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MGAAVAALLPAVAKAEDAPASQSDIVVTASPYAISRDETPTIVAKVDREKILRSGGASIT
DALADVPGIAATGFAAGASRPIIRGMDATRVRILEDGSSSSDVSDIGPDHGIPIDPLSAQ
SIEVVRGAATLRYGSQAIGGVVNVLNNRVPMTLPSQPLSGELTGSYDSVADTGQGSALMD
GRAGNLAVHADGFYRNAGDYDIPHGTQQNSFFRGYGETAGASYFFGPSSDSHVGVAIMQY
DAKYGIPSDSTYIDMRQTKVLTRSSFDVGSGLVRTLNIDGSYADYTHDEDEPDGTIDTTF
RNKEYDGHAELLLGPLGPLRNTAIGVEIQHRKFSAIGEDSSYLFPTLTQSEAGYLFTELP
LGDSLHLQASGRIEHVHVTGTPRSDIFTKTDYTPVSGAIGALFDASKAVKFGLTFSSTGR
APAMTELFARGGHDGPDTYETGDPNLRIERANSLEGTVRVNTGGLKFEGSAYSTWFHNYI
YGDLTGRSCDDDGVCVDGLDEELKELNYRQQDAHFWGFEGEATYNVLKAAGGTLQARLLG
DYTRAKLDDGGNVPRIPPYRYGGGLTWTAGQFDAGFLLLHAGRQNRFGAFDTPTPGYNEL
NAHVAVHPLKAYPGVELAVVGQNLTNDVQRDAAALNKADVVMPGRNIRLVLKVATF
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggctgttgccgcgctcctgcccgccgttgcgaaggccgaagatgcgcccgct
tcgcagtccgacatcgtggtgaccgcttcaccctatgccatcagccgggacgagacgccg
acgatcgtcgccaaggtcgatcgggagaaaattctccgctccggcggcgccagcatcacc
gacgcgcttgcggacgtgcccggcatcgcagcgaccggttttgccgccggggcgagccgg
cctatcattcgcggcatggacgcgacgcgcgtgcgcattctcgaggacggcagcagcagt
tcggacgtctcggatatcggtccggatcacggcattccgatcgaccccctttcggcgcag
agcatcgaggtcgtgcgcggcgcggccacgttgcgatatggcagccaggcgatcggcggt
gtagtcaatgtgctcaacaaccgcgtgccgatgacgctgccaagccagccgctctccggc
gagctgacgggaagctatgattccgtcgccgacacaggccaaggatcagcgctgatggat
ggaagggcgggcaacctcgccgttcatgcggacggcttttatcgaaacgccggggactac
gacatcccgcacggaacacagcagaacagcttcttccgtggctacggtgaaaccgccggt
gcttcatatttcttcggtcccagctcggacagtcatgtcggcgtggcgatcatgcaatat
gacgccaaatacggcatccccagcgacagcacctatatcgacatgcgtcagaccaaggtg
ctgacgcggtcctctttcgatgtcggctcgggtcttgttcggacgctcaacatcgacggc
agctatgccgactacacccatgacgaggacgaaccggacggcacgatcgataccaccttc
cgcaacaaggaatatgatggccacgccgaattgctgctcggtccgcttggtccgcttcgg
aatacggcgatcggtgtagagatccagcatcgaaagttctcggcgatcggcgaggacagc
agctatctcttcccgacgctgacgcagagcgaggcaggctatctgttcaccgaactgccg
cttggcgatagccttcaccttcaggccagcggccggatcgaacacgtccatgtcaccgga
acaccgcgttcggatatcttcacgaagacagattatacgccggtgagcggcgcgatcggc
gcgttgttcgatgcgagcaaggccgtgaagttcggcctgaccttctcgagcaccggccga
gcgccggcgatgaccgagctgttcgcgcgtggtggccatgatggtcccgacacctatgaa
acaggcgatccgaacctcaggatcgagcgggccaattcgctcgagggaaccgttcgcgtg
aataccggcggcctcaagttcgagggcagcgcctatagcacatggttccacaattatatc
tatggggatctcaccgggcgaagctgcgatgacgacggagtctgcgtggacgggctcgac
gaagagttgaaggaactcaactatcgccagcaggacgcccatttctggggcttcgaagga
gaagccacctataatgtcctgaaggccgcgggcggaactctccaggcccggctgctcggc
gactatactcgggcaaagctcgacgacggtggaaatgtgccgcgcatcccgccctatcgg
tacggcggcggactgacctggacggccggccaattcgatgccggcttcctgctcctgcat
gccggccgacagaaccgctttggtgcattcgacacgcccaccccgggctataacgagctc
aacgcgcatgtcgcggtccacccgctcaaggcctatccgggggtcgaactggcggttgtg
ggacagaatctcaccaacgatgttcagcgcgacgcggccgcgctcaacaaggccgatgtc
gtcatgcccggacgaaacatccggcttgtgctcaaggtcgcgacgttctga
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