Sphingobium sp. TA15: Sj15T_14410
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Entry
Sj15T_14410 CDS
T11324
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spta03032
]
Sj15T_14410 (ihfB)
03036 Chromosome and associated proteins [BR:
spta03036
]
Sj15T_14410 (ihfB)
03400 DNA repair and recombination proteins [BR:
spta03400
]
Sj15T_14410 (ihfB)
DNA replication proteins [BR:
spta03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sj15T_14410 (ihfB)
Chromosome and associated proteins [BR:
spta03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Sj15T_14410 (ihfB)
DNA repair and recombination proteins [BR:
spta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Sj15T_14410 (ihfB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDD66420
LinkDB
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Position
1:1443467..1443757
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AA seq
96 aa
AA seq
DB search
MIRSELIQKLAEENPNLNLQEVERIVDLFFKEIVDRLSSGGRVELRGFGAFTTRAREART
GRNPRTGEQVPVDAKRVPYFKPGKEMRERLNAKAAL
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatacgctcggaactgattcagaaattggctgaggaaaatccaaacctcaacctccag
gaagtggaaaggatcgtcgatcttttcttcaaggaaatagtcgaccgtctttcaagcggc
gggcgagtggaacttcggggcttcggcgcctttacgacacgggcgcgcgaggcgcgcacc
ggccgcaatccgcggacgggcgaacaggtgccggtggatgccaagcgggttccctatttc
aagcccggaaaggaaatgcgggaacggctgaacgccaaggctgcgctctga
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