Sphingobium sp. TA15: Sj15T_15180
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Entry
Sj15T_15180 CDS
T11324
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
spta Sphingobium sp. TA15
Pathway
spta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sj15T_15180 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spta03400
]
Sj15T_15180 (recO)
DNA repair and recombination proteins [BR:
spta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sj15T_15180 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sj15T_15180 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
BDD66497
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Position
1:complement(1543890..1544624)
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AA seq
244 aa
AA seq
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MATLITPALVCALRPHGEHGAIARLLTPGHGLLAGYVRGGRSRRLRPVLLPGNAVKAEFR
ARTEEQLAGLTVELEHSRAPLLAEPLPAAAIDWACALTAVALPEATPYPALHQALDGVLG
AVEAAPAARGWATALIRYELLLLAELGFGLDLGRCAATGGNDDLAYVSPRSAAAVSRAGA
VGYEDRLLPLPAFLLEGGAGEWPAILDGLRLTGFFLERSVLTDWRVDVLAARERLVDRLK
RAVA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctgatcaccccggccctggtctgcgcgctgcgcccacatggcgaacatggg
gcgatcgcgcgtcttctgactcccggccatggcctgctcgccggctatgtgcggggcggg
cgctcgcgccggttgcgccccgtgctgttgccgggcaatgccgtgaaggccgagttccgc
gcccggacggaggagcaactggccggactgaccgtcgaactggagcacagccgcgccccg
ctcctggcggagccgttgccggcggcggcgatcgattgggcctgcgcgctcaccgcggtc
gccttgccggaagcgacgccctatcccgcgctccatcaggcgctggacggcgtgctgggc
gcggtggaggcggcgccggcggcgcggggctgggccacggcgctgatccgttacgaattg
ctgctgctggcggaactgggcttcgggctggacctcggccgttgcgcggcgaccggcggg
aatgacgatctggcctatgtctccccgcgcagcgcggcggcggtcagccgggcgggcgcc
gtcggctatgaggaccggctgctgcccttgcccgctttcctgctggagggcggggcaggg
gaatggcccgccatattggacggcttgcggttgaccggcttcttcctcgaacgctccgtc
ctcaccgattggcgcgtcgatgtgctggcggcgcgagagcgcttggtggacaggctgaaa
agagcggtcgcctaa
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