Sphingobium sp. TA15: Sj15T_25210
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Entry
Sj15T_25210 CDS
T11324
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spta03016
]
Sj15T_25210 (rnd)
Enzymes [BR:
spta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Sj15T_25210 (rnd)
Transfer RNA biogenesis [BR:
spta03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Sj15T_25210 (rnd)
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Other DBs
NCBI-ProteinID:
BDD67500
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Position
1:2565405..2566571
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AA seq
388 aa
AA seq
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MQIHPLITDSKTLAQFCARIAKSPYIAVDTEFMRENSYWPDLCLVQVADEHEAAAIDPKA
PGLDLSPLLDLMVDNEDVLKVFHAGGQDLEIIYNLTGKTPHPLFDTQIAAMALGLGEQIG
YGNLVDAWLGVQLDKGARFTDWARRPLDKRQIDYAIGDVTYLIQIFPKMLEELRRTGRGD
WLDQEMERISDPSNYENKPEEAWQRVRIASRKADVLGRLKALAAWREMEAQDKNLPRGRI
VKDETLADIASHPPRTQEDLGKVRGLSATWKTNDIGNRLMLALASHAPLAKEEMPERDPK
RPGLGKDGALVADLLKLLLKIRSRDINVAARLIARSDDIDALAAGVREDLAILEGWRYEQ
FGRDAVDLVEGRLAFAVKNGRLKMTRTQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccatccgctgattaccgacagcaagactctcgcccaattctgcgcccggatc
gccaagtcgccctatatcgcggtcgataccgaattcatgcgcgaaaacagctattggccc
gacctctgcctggtgcaggtcgcggacgagcatgaggcggccgccatcgatcccaaggcg
cccggcctcgacctgtcgcccctgctcgacctgatggtcgacaatgaggacgtgctgaag
gtctttcacgcgggcgggcaggatctggagatcatctacaacctcaccggcaagacgccc
catccgctgttcgacacgcagatcgcggcgatggcgctgggactgggcgagcagatcggc
tacggcaatctggtcgacgcctggctgggcgtgcaactcgacaagggcgcgcgcttcacc
gactgggcgcgccggccgctcgacaagcggcagatcgattatgcgatcggcgacgtcacc
tacctgatccagatattccccaagatgctggaggaactgcgccgcaccggccggggcgac
tggctggatcaggagatggagcggatcagcgacccgtccaattacgagaacaagccggaa
gaggcctggcagcgcgtccgcatcgccagccgcaaggccgatgtgctgggccgcctgaag
gcgctggcggcatggcgcgagatggaggcgcaggacaagaacctgccccgcggccgcatc
gtcaaggacgagacgctggccgacatcgccagccacccgccgcgcacgcaggaagacctg
ggcaaggtgcgcggcctgtccgccacctggaagaccaacgacatcggcaaccgcctgatg
ctggcgctggcaagccacgcgccgctcgccaaggaggaaatgccggagcgcgaccccaag
cggccgggcctgggcaaggacggcgcgctggtggcggacctgttgaagctgctgctgaaa
atccgttcccgcgacatcaacgtcgccgcgcgcctcatcgcccgcagcgacgacatcgac
gcgctggcggccggcgtgcgggaagacctcgccatcctggaaggctggcgctatgaacag
ttcggccgcgacgcggtcgacctggtggagggtcgcctggccttcgctgtcaagaacggc
cgcctcaagatgacccgcacgcaatag
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