Sphingobium sp. TA15: Sj15T_27490
Help
Entry
Sj15T_27490 CDS
T11324
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spta Sphingobium sp. TA15
Pathway
spta03030
DNA replication
spta03430
Mismatch repair
spta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sj15T_27490
03430 Mismatch repair
Sj15T_27490
03440 Homologous recombination
Sj15T_27490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spta03032
]
Sj15T_27490
03400 DNA repair and recombination proteins [BR:
spta03400
]
Sj15T_27490
Enzymes [BR:
spta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sj15T_27490
DNA replication proteins [BR:
spta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sj15T_27490
DNA repair and recombination proteins [BR:
spta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sj15T_27490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BDD67728
LinkDB
All DBs
Position
1:2797971..2798663
Genome browser
AA seq
230 aa
AA seq
DB search
MREIIFDTETTGFDPASGDRLVEIGCIELLNRVPTGRTFHAYYNPQRSMPAAAEAVHGLS
DSFLRDKPLFSHGVEELLAFLEDSHLVAHNARFDFGFLNHELRLCGLPEVSMARMIDTVA
IARQLHPGAKHSLDALCTRYGIDRSHRIKHGALLDAELLAQLYIELTGGRQIGLGLAQEE
EKRVANMELAAEVAVRPVRPARVFAASAEELERHAAFVATLEKPLWLEEA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcattttcgacaccgaaacgacgggattcgacccagcttccggagatcgc
ctggtcgaaatcggatgcatcgaacttctcaaccgggttcccacgggccgcacattccac
gcttattacaatccgcaacggtccatgccggccgcggcggaggcggtgcacggcctgtcc
gacagcttcctgagggacaagccgctgttttcccatggggtggaggaactgctcgccttt
ctggaggacagccatctggtcgcgcacaatgcgcgcttcgacttcggcttcctcaaccac
gaattgaggctgtgcggattgcccgaagtgtcgatggcgcggatgatcgacaccgttgcc
atagcgcggcagcttcaccccggcgccaagcacagcctggacgcgctctgcacccgatac
ggcatcgaccgcagccaccgcatcaagcatggcgcgctgctcgacgccgaattgctggcc
cagctttacatcgagttgaccggcggccgtcagatcggcctcggtcttgcacaggaggaa
gagaaacgcgttgcaaatatggaacttgcggcggaagtcgcggttcgccctgttcgtccc
gcgcgcgtctttgcggcaagcgcggaggagctggagaggcatgcagcgttcgtcgcgacg
ctggaaaagccgctctggcttgaggaggcctga
DBGET
integrated database retrieval system
