Sphingobium sp. TA15: Sj15T_32270
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Entry
Sj15T_32270 CDS
T11324
Symbol
rlmE
Name
(GenBank) ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
spta Sphingobium sp. TA15
Brite
KEGG Orthology (KO) [BR:
spta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spta03009
]
Sj15T_32270 (rlmE)
Enzymes [BR:
spta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
Sj15T_32270 (rlmE)
Ribosome biogenesis [BR:
spta03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sj15T_32270 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
Methyltransf_25
CoV_Methyltr_2
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
BDD68206
LinkDB
All DBs
Position
1:3321057..3321728
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AA seq
223 aa
AA seq
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MRGTGAGKVRVKTAKGRTAQSTRWLERQLNDPYVRRAKAEGWRSRAAFKLIELDEKFHFL
KGSRAVVDLGVAPGGWAQVVRKLCPKAKVVGIDLLPTDPIPGVTLFQMDFMDDKAPALLA
EALGDAPDLVISDMAANTVGHAATDHLRTMGLVEAAAMFAVENLRKGGTFVAKVFAGGTD
ADLLAILKRHFTTIKHAKPPASRKGSVEWYVVAQGFKGRPEEG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgagaggtaccggtgccggcaaggtgcgggtcaagacggcgaaggggcggacggcgcag
tccacccgctggctcgaacgacagttgaacgacccctatgtccgccgcgccaaggcggaa
gggtggcgcagccgcgccgccttcaagctgatcgagctggacgagaagttccatttcctg
aagggttcccgcgccgtggtcgacctgggcgtggcgccgggcggctgggcgcaggtggtg
cggaaactctgccccaaggcgaaggtggtgggcatcgacctgctgccgaccgatcccatt
ccgggcgtcaccctgttccagatggacttcatggacgacaaggcgcccgccttgctggcc
gaggcgctgggcgacgcgcccgatctcgtcatttccgacatggcggccaacaccgtcggc
catgcggcgaccgaccatctgcgcaccatgggcctggtcgaggcggcggcgatgttcgcc
gtcgaaaacctgcgcaagggcggcactttcgtggccaaggtgtttgcgggcggcaccgac
gccgacctgctggccatcctcaagaggcatttcaccacgatcaagcacgccaagccaccc
gccagccgcaagggcagcgtcgaatggtatgtcgtggcccaaggcttcaaggggcggccc
gaagaaggctga
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