Strongylocentrotus purpuratus (purple sea urchin): 100888699
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Entry
100888699 CDS
T01019
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100888699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spu03009
]
100888699
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
Pre-60S particles
RNases
100888699
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
100888699
NCBI-ProteinID:
XP_030852143
UniProt:
A0A7M7PJF5
LinkDB
All DBs
Position
Unknown
AA seq
1536 aa
AA seq
DB search
MFPTAGLFRGVLCPENDENKGRCKRPYCHFRHIRRVPNVEAATEPKFPGEQKAAKTRPAI
ESSSLPSHRRPKDRTPATKPIQYVPTPLFLCKKPTKDAFTEESTEEEEECIKDAGPASGA
GLSSYTPTPLADLEALADVNDDTVPGDDMSLMDAHAGDFPEGQSVKASSDDYQEIVPLSI
DEKDPRAEQPAVSDGEREDMIIETHTYGGVTVTTRTPRSLCRPDQASMEEEDEYNPFSSV
LEPSEKSDERHNKTSLTSPGDKESLRRIQPDANFEPLSKGDEYPTYGISDVLMDDGDSNG
KDFKGYSNTSSYSYMDDVPTTDLEYHPYSYATLDSNVGVALPAYSTAGSIVEETDCHDDL
DGGYDMDSLEQYHEKETAKLELKKKSEKKINVDKQLSESKSKKGLEESRSTKTKLNAEKK
VVSSKKKEVTAPSSKSVNPSKGKTTTALGTSVKMTSKPKPCQEETDPKKMVSNNKKLLKS
KSEVNMQEKDDNAKKESKKEKIDNKIQLAKSATKGNVISGKDKVIEKSKPKVSAEQLANF
FKKRQESTGMKSQGKRKMKDLTGIAQVKSEGMKRTEESNSLKNVSKGTSSHRKDSNIKEK
QQGKQETPKTPLSDRSLFQSLGKPSAKVLPKKSSIKECDIDIFAISNDSSSDEGDGARSK
ASSKSKHSVISAVPRKRSVSSDKNRQANESENGVKKKRTASPSKTNDPKRLRKLSTSPLK
KESTKLIDMDLFGDDSDGDSDEINFLSISEDRHESPNKFPKKSADVSSIKTEGCSSTSDR
QRKVACSNSAEVSGTSSIGNFLPNTSKVKSSKVGPSKKLVNSVTQNTPASGQGQKQSSKG
TLPKKKDHIQEQGKVRTSHATRDISHESRKHKPVKNLSRAKAEVVSISDDEDSSDLPNGF
ASSDDDDDGGHDMGGTSNDIGNHGDEREDESEHMAEMRRFMEDSSSEEDISNECYRIFQE
VQPKASKPSSQVTTFQKRPVEERKGSNSAPSSVGKQRMAHASKFGDVKRKPTPKKPANSR
PGPAQMCHNRYLMMERRLERASQEGESGETSSGASITGKKRIAHQSGTTNNTLRQLTLGE
SSSEKKTTTVMTSKMGKRTAHMPKTVSKRPMIPTDYGSKVPMNIRQRYLNVFIDELLKTT
EEDQDAFDKALDEEKLVYQRASSKNIYLNLCVNALKKLKNQTDSRLQIPPSTPSSLFPSR
VVSHEAVLGGKLAAQTSYSIHKHSNLDTESFEGIHLYEKLQRYALTEELLRENGYPRPSE
TSGQALVFKEERNKTYASSDPNQQVCCRCGSTYLRNPQGKYITRESCTYHWGRPWTRRIC
GMIESRFSCCTGDMETKGCCISKYHVTDNKHGDLSGYMKTMPKDIQRNGHPGMFALDCEM
CYTSMGLELTRVTVVDDHLNEVYDTLVQPDNEVVDHNTRFSGITENDLKRVTTKLRDVQA
VLLNMFSAQTILIGHSLESDFLSLKLLHSTVIDTAIVFPHRRGPPLKRALKTLMAEYLNR
LIQDDVGGHDSTEDARSCMELMIYKAKEDAKVKRKR
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctactgcgggcctttttcggggagtcctctgcccagagaatgatgaaaacaaa
ggaagatgcaaaaggccatattgccacttccgacacattcgcagagtcccaaacgtagaa
gctgcaactgagccaaagtttcctggagaacagaaggcggctaaaaccagacctgctatt
gagagtagtagcttaccttcccatcgtaggcctaaggacaggactccagccaccaaacct
atccagtatgtccctactccgctgttcctctgcaagaagcctactaaagatgccttcacg
gaggaatcaacagaggaagaagaggagtgcatcaaagatgctggacctgcttcaggtgcc
gggttatcgtcttacacgccaaccccattggcagacctggaggctttggcagacgtgaat
gatgacactgttccaggagatgatatgtcattgatggatgctcatgcaggagatttccct
gagggtcagtcagtaaaggccagttccgatgattaccaagaaatagtgccattgtccatc
gatgaaaaggatccaagggctgaacagccagctgtttcagatggagaaagggaggacatg
atcattgagacacatacttatggaggagttaccgtgacaacaagaactcccaggagttta
tgtagacctgaccaagcatctatggaggaagaagatgagtacaacccatttagttctgtc
ttggaaccaagtgaaaagagtgatgaaagacataataagacatcactgacatctcctgga
gacaaagaatccttgagaaggattcaacctgatgcaaactttgagcccctttcaaaaggt
gatgaataccctacttacggaatatcagatgtcttgatggatgatggtgacagcaacgga
aaggacttcaagggatattccaatacttcctcgtattcttacatggatgatgtacctaca
acagatttggagtaccatccttacagctatgctactttagacagtaatgtaggagttgca
ctcccagcctattcaacagcaggaagtattgttgaggaaacagattgtcatgatgacctt
gatggaggctacgatatggatagccttgagcaatatcatgaaaaagaaacagctaagttg
gagttgaaaaaaaaatcagagaaaaagattaatgttgataagcagctgtctgaaagcaaa
agtaaaaaaggccttgaggaaagtagaagtaccaagacaaaactcaatgctgaaaagaaa
gttgtgtcgagtaaaaagaaagaagtaacagctccatctagtaaatcagtgaacccgtcc
aaaggaaaaacaaccactgctttagggacatcagttaagatgacttccaaaccaaagcca
tgtcaagaggaaactgatcctaaaaaaatggtgtcaaacaacaagaaacttcttaaaagt
aagagtgaagtgaacatgcaggaaaaagatgataatgctaagaaagagagcaagaaggaa
aagatagataataagattcaattagcaaagagtgcgaccaagggaaatgtcatttctggt
aaggacaaagtcattgaaaaatcaaaaccaaaggtttcagctgagcaattggcaaacttt
ttcaaaaaacgtcaagaatccacaggaatgaagtcgcagggtaagagaaaaatgaaagac
cttacaggaatcgcccaagtaaagagtgaaggtatgaaaaggacagaagaaagtaattct
ttgaaaaatgtttcaaagggaacaagtagtcacaggaaagattccaatatcaaagaaaag
caacaaggaaaacaagaaactccaaagacacctttgagtgatcgtagtctgttccagtca
cttggaaaaccatcagccaaagttttgccaaagaagtcatccatcaaagaatgtgacatt
gatatatttgcgatatccaatgactcaagttctgatgaaggtgatggtgcaagatcaaaa
gcatcatctaaatcaaaacattctgtcattagtgctgtaccaagaaaaagatcagtatca
tctgataagaacaggcaagctaacgaaagtgagaatggtgtgaagaaaaaaagaactgca
tccccttccaaaacaaatgatccaaagcgattgaggaaactctctacctcgccattgaag
aaagaaagcaccaaactcattgacatggatttgtttggggatgatagtgatggtgattca
gatgaaataaactttctatcaatatcggaggatagacatgaatctccaaataaatttccc
aagaaatctgcagatgtttccagcatcaagacagaaggctgttcttcaacgtctgatcgg
cagaggaaagtagcttgctccaattcagcagaggtatcggggacatcatcaattgggaat
ttccttcctaacaccagcaaggtcaagtcttctaaggttggtccttccaagaaactagtg
aattctgtaacacaaaatactccagccagtggacagggtcaaaagcagtcttccaaaggc
accctgcccaagaagaaagaccacattcaggagcaagggaaagtcaggacaagtcacgca
acgagagacatttcccatgagagtagaaaacataaaccagttaaaaatctgtcacgtgcg
aaagcagaagtcgtttctatctctgatgatgaagacagttcagatctgcccaatggtttt
gcatcaagtgatgatgatgatgatggtggtcatgatatgggaggaaccagtaatgacatt
ggtaaccatggcgatgaacgagaagatgaaagtgaacacatggcggagatgagaaggttt
atggaggacagttcttcagaagaggacatatctaatgagtgttatcgcattttccaggaa
gtacagccaaaggcatcgaagccaagcagtcaagtaacgacgtttcagaaacggccagta
gaagagaggaaaggttcaaattcagctccatcatctgttggcaaacagcggatggctcat
gcttcaaagtttggagatgttaaacgaaagccaaccccaaagaagcccgccaactctcga
cccggcccagcccagatgtgccacaatcgctatctcatgatggagcgtcgactagagagg
gcgtcccaggagggggaatcgggggagacctcatctggtgcttcgatcacagggaagaag
aggatagcgcaccaatcaggcactaccaacaacactctcaggcaactgacactgggggaa
tcctcctctgagaagaagaccaccactgtcatgacctctaagatgggcaagagaacggcg
cacatgcccaagacggtgtctaagagacccatgattcccacagactatggcagcaaggtt
ccaatgaacatcaggcaacgatacctcaatgtcttcattgatgagctgctcaagacgaca
gaagaagaccaagatgcctttgataaggccctggacgaagagaagctggtgtatcagagg
gcctccagcaagaacatctacctgaacctgtgtgtcaacgccctgaagaagctcaagaac
caaacggacagcagactacagatccctccatccactccatcctcactcttcccatcaagg
gtggtgtcccacgaggctgttctaggtggcaagctggctgcacagacctcctacagcatc
cacaagcactccaaccttgacaccgagagctttgaagggattcacttgtatgagaagctg
cagcgctacgccctcacagaagagctgctgagagagaacggttaccctagaccctcggag
acctcaggtcaagctctcgtcttcaaggaagaaaggaacaagacatatgccagtagtgat
cccaatcagcaggtttgctgtcgttgtgggtcgacgtacctaaggaatccccaaggcaag
tacatcaccagggagtcgtgcacctaccactggggcaggccatggacacgcagaatttgt
gggatgattgaaagtcgattctcatgctgtaccggagacatggaaaccaaaggatgctgc
atttcaaagtaccatgtgacagacaacaagcatggtgacctctcaggctacatgaagact
atgcccaaggacattcagaggaatggacacccaggcatgttcgcactagattgtgaaatg
tgttacacatcgatgggtcttgaattgactagggtgacggtggtcgatgatcacctaaat
gaagtatacgacaccctggtccagcctgacaatgaagttgtcgaccacaacacaaggttc
agtggtatcacagagaatgatctaaagcgtgtgaccaccaagcttcgagatgtccaagca
gtgcttctcaacatgttctctgcacagaccatcctcataggccacagcttggagagcgac
tttctatcgctgaagctgctacacagtactgtgattgacactgcaattgtctttccccat
cgtcgtggtcctcccctaaagagggcgctaaagaccttgatggccgagtatctcaacaga
ctcatccaagatgatgttggtggccatgacagtactgaggatgccaggagttgtatggaa
ctcatgatatacaaagctaaagaagatgccaaggtgaagaggaaaagatga
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integrated database retrieval system
