Strongylocentrotus purpuratus (purple sea urchin): 100888713
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Entry
100888713 CDS
T01019
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100888713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spu04121
]
100888713
03400 DNA repair and recombination proteins [BR:
spu03400
]
100888713
Ubiquitin system [BR:
spu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
100888713
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100888713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTB
Motif
Other DBs
NCBI-GeneID:
100888713
NCBI-ProteinID:
XP_030836332
UniProt:
A0A7M7NGZ0
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MMDEHTQLAMALSISMIGEKEQGSTAIEVPIKDPAVKPKKKRGRKKKKTDEDPDEQTRIA
MAISASLADETKQKNKDLGKNEERPGKKTRAKAKKKLKKIHAEFPVLLTRLDDERQKILE
GRISALLEPKHSEDIIFSDHVFQRSNIRTKYSDPDSRPLTETYPGNIRIKSGLQLWNATG
ADLSWKQTGRSPFYVEQLQPTIVPLTPKSHTSPISHQVFSKTPTETPSKQSPKAAVLSNE
GSVEESFSTTQSLGMTVQCLAELAEEGLQDSTSLSLSSDKCGFIPQETAHRADSPENRLS
DDQLTLLEDLSSLVNSPTMSDAVIQIDDGSKLHVHSFMIQLRCPALATLLAKPFGRKSTG
LPSIVVSDMGYEAMENVLSYIYSATVNISNDTAVETHKFAERFEMADLASHCKPYLQDDT
DSKIRRKGSELDIVDKDLNQLIDSLWEDEEDDKEEKNRDAGRTSDDDVNDALDDDEIKEI
YESSQRFRTIMLEDEELEDDSPFREFVHSSVSSPKNIENDGERMMDEEEEEEEELHKMML
TQGHRRSNTSSYCSRDNSNSDNEDWSMAIDDEVVVQGEVNAQCVTPLAKRTTDERKDMIG
ENLNECTEDIVDETPKETYNSRRRVSVSSSSTNETITDEHHHISFLNQTLVRESNVSAIS
MTDRQKKRKASPETSNISKGGSMGLECGDGVKVLHKRFLDAGVEHSESPDDEVLFLRMDS
AESESDGRNRTLEKSLQSVRETSLQVENSTGLNGKVQDRGFEDTDQGRLSSSRKKNC
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagcatactcagcttgctatggccttgtccatatcaatgataggggaaaag
gagcaaggtagcacagccatagaagtacccatcaaggatccagcagtgaaaccaaagaag
aagagaggcaggaaaaagaagaaaacagatgaggaccctgatgagcaaacccggattgcc
atggcgatatcggcatctctggctgatgagacgaagcagaagaataaagatcttgggaag
aatgaagagagaccaggaaagaagaccagggctaaggctaaaaaaaagctcaagaagatt
catgctgaatttccagttctgttaacaaggctagatgatgaacgacagaaaattttggaa
ggacgcatcagtgctcttctggaacctaaacactctgaggacattattttctctgaccat
gtgtttcaacggagtaacatcaggacaaaatattcggaccccgacagtcggcctctcaca
gagacctaccctgggaatattagaataaagtctggtcttcaactatggaatgccactgga
gcagacctatcatggaagcagactggtaggtcacccttctatgtggagcagctgcagcca
acgattgtacccttgactccaaaaagccataccagtcccatctcacatcaagttttcagc
aagactcctactgagaccccaagcaagcagtctccaaaggctgcagtactatcaaacgaa
ggcagtgtagaagagagcttcagtacgacgcagtccttgggtatgacagtgcaatgcctg
gctgagctagcggaggaaggactgcaagactcaacatctctgtctctgtcatcagataaa
tgtgggtttattccacaggagacagctcacagggcggacagcccagagaatcggctgagt
gatgaccagctgaccctcttagaagacctgtctagtttagtgaactcacccactatgagt
gatgctgtcatacagatagatgatggcagtaaacttcatgtgcatagcttcatgatccaa
ctgagatgccccgccttagcaacgcttctggctaaaccatttggaagaaaaagcaccggc
cttccatccattgttgtgagtgatatgggctatgaagcaatggagaatgttctgagttat
atttattcagccactgtcaatattagtaatgatacagcagttgaaacccacaaatttgct
gaaagatttgaaatggcagatttagcctcacactgcaagccatatcttcaggatgacact
gactctaagataagacggaaaggaagtgagctggacattgtggataaagacctcaaccaa
ctcatcgacagtctgtgggaagatgaagaagatgacaaggaggagaaaaatagagatgct
ggtcgaacgtcggatgatgacgtgaatgatgccctcgacgatgatgagatcaaagagatt
tatgagtcatcccaacgattcaggacgataatgttggaagatgaggagttggaggatgat
tccccctttagggaatttgtccactctagtgtcagcagcccgaagaatatcgagaatgat
ggtgaaaggatgatggatgaggaggaggaggaggaggaggagcttcacaagatgatgttg
acacaagggcatagacggagtaataccagtagttactgttcccgtgacaacagcaatagt
gataatgaggattggagcatggcaatagatgatgaagtggtagtacaaggtgaagtaaat
gcccaatgtgtgacccccttagcaaagaggactactgatgaaaggaaagatatgattgga
gagaacttaaatgagtgtactgaagacatcgttgatgaaactccaaaggaaacatataat
agcagaaggagggtcagtgttagttcctcatcaacaaatgaaacaattactgatgaacat
catcatatatcgttcttgaatcagacactagtacgtgagagtaatgtcagtgcaatatcc
atgacggaccgtcagaagaaaaggaaggcatccccagaaacttcaaacatatctaagggt
ggcagtatgggtttagaatgtggtgatggggtcaaagttttgcataagcgctttttggat
gctggtgtagagcactcagagagtcctgatgacgaagtactattccttcggatggattct
gcagaatctgagagtgatgggcggaacagaactttggagaagagtctgcaaagtgtacgg
gaaacaagtttacaggtagaaaatagtacagggttgaacggtaaggtccaagatcgtggc
tttgaagacactgatcaagggagattaagttcttcaaggaaaaaaaactgttga
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