Strongylocentrotus purpuratus (purple sea urchin): 100889424
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Entry
100889424 CDS
T01019
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100889424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
100889424
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100889424
mRNA degradation factors
5'-3' decay
Lsm complex
100889424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100889424
NCBI-ProteinID:
XP_030842188
LinkDB
All DBs
Position
Unknown
AA seq
134 aa
AA seq
DB search
MEYMPGTASLIDEINKKLLVVLRDGRTLIGILRSIDQFANLVLHRTIERIHVGRQYGDIP
RGVFVVRGENVVLLGEIDTENESTHSLEEVSIDEILEAQRDEQLKNQEEEKTRNKKLLER
GLQPHGEQGIDEFP
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggaatacatgccagggacagctagtttgatcgacgaaatcaataaaaagttgctggtt
gtactaagagatggaaggaccctgataggtattctccggagtattgatcagtttgcaaat
cttgtactgcaccgcaccattgagaggatacacgtaggcagacagtatggagacatacca
aggggtgtgtttgtcgtcagaggagagaacgttgtcctccttggtgaaatagatacagag
aatgagagtactcatagcttggaggaggtttctattgatgagattcttgaagcacagaga
gatgaacagctcaagaaccaggaggaagagaagacaaggaataagaagctcttagagaga
ggactccagccccacggtgaacaaggcattgatgagttcccatga
DBGET
integrated database retrieval system
