Strongylocentrotus purpuratus (purple sea urchin): 100891557
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Entry
100891557 CDS
T01019
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100891557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
100891557
03036 Chromosome and associated proteins [BR:
spu03036
]
100891557
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100891557
Coactivators
SAGA/TFTC/STAGA complex
100891557
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100891557
STAGA complex
100891557
TFTC complex
100891557
SAGA complex
100891557
SLIK complex
100891557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Nup120_160
WD40_like
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_Vps41
WD40_RFWD3
PEP5_VPS11_N
WDR54
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
100891557
NCBI-ProteinID:
XP_030830655
UniProt:
A0A7M7N3F7
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MKRVGNDQIQSAVLQYLKRRQYIDINSESVNRKNLKLTDSLREMASQSSRKKEMGAVNSV
SCNSCDQEPDVFEQQFARFRLFIENSVEEYKPDLLYLLYPTFAHLYLQMISDGHRLNAHS
LYTKHKGCTQYQDSQDAKELMERLSSVHHSMDLISDPQLSAFRESKCVVELGDEALQYLL
RFLQSRDNSVLLSIINVHIDIKVRYSLSTSLQEAGEEYPQPSSSSSSSSSLSSSLPSAPK
QTGDVSMKEDDKREVEREAFLTQLRATIDKVQRGPPPVPSVILYSVLNAYQGLSSVSFSD
DSQMLAGGFEDSAVRVWSLTSKKLKTESHDADVSRVRLAGDCLHKDVIEDSLGSECKVMR
GHSDTVYSNCFIPNAPLLLSASGDATVRAWSMDTFSNVAVYRGHKYPIWDLDVSLFGVYF
CTASKDQTARLWSPERTYPVRVLSGHLMDVDCVKFHPNCKYIATGSNDKTIRLWDITQGK
SVRLLTGHKSSVLCIAFAPNGKYLASAGEDRRVRVWDLATGGLMKELRGHTDTVYSLAFN
PDSSMLASGGADCTIRLWDIRQGVKHTVPESGGHSGEQMASISSRQTHIHKLSFSKCNLL
LAGGGIAMAT
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtaggcaacgatcagatccagtctgcggtactccaatatttgaaaagaagg
caatacattgacatcaacagtgagagtgtaaaccggaaaaacctgaaactgacggactcc
ttgagagagatggcgtctcagtcatcgcggaagaaggagatgggagcagttaactctgtc
tcttgtaattcatgtgatcaggaacctgacgtttttgagcagcagtttgccagatttagg
ctcttcattgaaaattcagtggaagagtataagccggacctcctatacttgctgtaccct
acgtttgctcacctgtatttgcagatgatatctgatggacatcgactcaatgcccacagc
ctctacacaaagcacaaaggatgcactcagtatcaagacagtcaagatgccaaggagttg
atggagagactgagtagcgtgcatcacagtatggatcttatcagcgaccctcaactctca
gcattcagggagagtaaatgtgtggtggagcttggagatgaagccctccagtatctcttg
cgtttcctccagagtcgagataactctgttctactcagcatcatcaatgtgcacattgat
atcaaagttcgatactcgttgtccacatccttgcaagaagccggtgaagagtacccacag
ccatcctcctcctcctcttcctcctcctccttgtcttcatcactgccgtctgctccaaag
caaactggcgatgtgtctatgaaggaagatgataagagagaggtcgagagggaggccttt
cttactcagctgcgagcaaccattgataaggtccagaggggaccaccccctgtgccttcc
gtcatcttgtatagtgtcctcaatgcctaccaaggactgagttctgtgagtttctctgat
gattcccagatgttagccggtgggttcgaggattcggccgtcagggtgtggagtctcacc
tctaagaaactcaaaaccgaatcccacgatgctgatgtgagtcgtgtccgcttggctggc
gattgtctacataaggatgtcatagaggatagccttggttctgagtgtaaggtcatgaga
ggtcacagtgatactgtatatagtaactgcttcatacccaatgctcctctgctcttatca
gcatcaggggatgctacagtgcgagcgtggagcatggacaccttctccaacgtggccgtg
tacagggggcacaagtaccctatctgggaccttgacgtgagcctgtttggggtctacttc
tgcaccgcctccaaggaccagacggcccggctctggagcccagagaggacctatcctgtc
agggtactctcaggtcatctcatggatgtagattgtgtcaaattccatcctaactgcaag
tatatagcgacaggctcgaatgataagaccattcgactgtgggatattacacaaggaaag
tctgtgcgcttattgacaggacacaagagttcagtgttgtgcatagcatttgctccaaat
gggaagtaccttgcatctgctggtgaagatcgtagggttcgtgtttgggacttggcaaca
ggaggtttgatgaaggagttgagaggacacacagacactgtttattcactagcattcaac
cccgatagctctatgctagcttccggtggggctgattgcaccataaggttatgggatatc
aggcaaggcgttaagcacacagtacctgaaagcggtggacattctggagagcaaatggca
tccatctcttccagacagactcacattcacaaactctccttctccaagtgcaacctccta
cttgctggtggaggtattgccatggcaacctga
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integrated database retrieval system
