Strongylocentrotus purpuratus (purple sea urchin): 100892277
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Entry
100892277 CDS
T01019
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100892277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
100892277
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100892277
mRNA cycle factors
Common to processing body (P body) and stress granule
100892277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
100892277
NCBI-ProteinID:
XP_011670922
UniProt:
A0A7M7LT59
LinkDB
All DBs
Position
Unknown
AA seq
1450 aa
AA seq
DB search
MNFVQLLRKANDLKVQLTAEGGSDAWVSRQALQDAFHQLLLLDLETALDKKLEQELWNHV
FKNHISSLQHKARDRMNPKRSEVQAMLSLLLDNASGFYIQLLQEICSAFSVQLMCRIKAQ
RLGLFQETLPSSQKPVQPKAVSCHYICQHCLVHLGDIARYRNDTHQAESFYCHAASLVPS
NGQPYNQLAIVSATKGDQLSMAFYYIRSIAVKHPFPAAATNLQTTYAKLVDRDEVKIFKM
REVELIHYFIKFHAIIYLASCEQDLQVASSIKDKLEENFRSHLSQEILTSRQLTQMAAIN
LFALHSIRQHTNNGERGTKMATTDLGGMVGVQDLGPYAANNLQCWTLVMGFTFNLLQMML
HYAPQKGGESPVDAWPGLPAVRLVLGWIYLQPAIFDDPVLSNKTGVWSKLGRVLTSLQVD
ASPQVDDSTSSLPLPEDNLLDGFSPQQEFQRDLDFGKNKRQGWNRNAINQERSQRLSSQG
KWLAHHQPSLLKVETNPSNKLVFTSPLGDDVTSRRSSHHQQRQQRAAKAATNIKGTETSS
RVASIEKDTPKKIAGAHRKDGSRDRGSEENHSKTIAVQAIMSRPNSDVNKPTAIFKGQGQ
ERTTGQGSSSKSSKSPSSGTTKDLEGSKRHVQWQNPPHAFAQEPASYYPPKPHPTSQPHP
NAQPHLGPGAAQPGQQPQAPGLAPAPRHPPPSGPYPQQGGQQRLPHPYGHPPPPGPPPPG
VPPPSMGMPPPDQMYPPPHMGPPPSFNPSSQNAPPRAMHPPPPRPMGPPPMPHMAPPGWQ
QPHRDVSRDGQPTHLPRDGPPSPRGVPPHMQPPKVQIPPPMPQGTQMSPNSNMPQPPGHP
HHQGSWPTRPGPMPTVGERQEDHPTGDTMSNISMWNAAMQDKLTHAHMQRGGPPDMQQYQ
QQGQQGMGRDTSPMRSPIDNSTQFRLSPSVEDFGQGPVQANQPPRRMSNPTEMQMQGFGP
NQNFDQGRMNYMPSMAKPHEHQVRMQPQQKQQQQPSGGPPPQILDNQGANLLELLAKMQR
QIVPENPIGSGSSRTKMRYSPEEHSVDSFRANLDNPSIQQKNLRDPPGFRNASERFYDDQ
LAKNNGRSGGPDYYSMQQGDQRGMIGYNPLSNKSQGGSAFRKVQPQQPDREDSLFPQSDL
ESKGSRSYEPGDPFSFFTGSSNQQEKQQHSQRQQLLGGDIFGQESGLQEPTQSFQYRRSS
GGLYENSTPGFTSSQPQTSGSDNTWRMENREDGNQHLRGIFPGPKAGGGAGGTGGSGAGS
SAGRRGSEEMTSAGYNARWTGDAQEQMAGEGTRRPSQDALFNQMNSGGSGLFQRESYMEQ
EPSAPYPTPQHHQSTTSKNSYFSGSALKGKQSDEENAFSSSGSSYSLFSSPSPWSSRQEE
DGGGMSKSGEGLGSTLGLKWREPQLSSSPTSSLLPERIQSIWSSPMRSEQSPLEKILGHT
VSLEQQKPDT
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgttcagctcttacggaaggcgaatgacctcaaggtacaactgacagcggaa
ggtggaagtgatgcgtgggtgtctcggcaggccttgcaagatgccttccatcagctgctc
ctcctggatctggagacagcgctggataagaagctagagcaggagctctggaaccatgtc
ttcaagaaccacatctcatcgctgcagcacaaggcccgtgatcgtatgaaccccaagaga
tcagaagttcaagccatgctttcccttctccttgacaatgccagtggtttctacatccag
ctcctgcaagagatctgcagtgcattcagcgtgcagctgatgtgtcgcatcaaagcacaa
cgcctggggctgttccaagaaacactgccctcatctcagaagcctgtccaacccaaggct
gtatcatgccactacatctgtcagcactgtctcgttcatctaggagatattgctcgttac
cgtaacgacacccaccaggcagagagcttctattgccatgcagccagcctggtgccatcc
aatggtcagccctacaaccagctggccatcgtctcggccactaaaggtgaccaactgtcc
atggccttctactacatccggagcatagcggtcaagcatcccttcccagcggctgccacc
aatcttcagaccacctatgccaagctggttgaccgggatgaggtgaagatcttcaagatg
cgtgaggtggagctcattcactacttcatcaagttccatgccatcatctacctggcttcc
tgtgaacaagaccttcaagtagccagctccattaaggacaagttagaggagaacttccgc
agccacttgtcacaggagatcctgaccagtcgccagctgacgcagatggcagccatcaat
ctctttgccctgcacagtatccgccagcacaccaacaacggcgagcgtggaaccaaaatg
gctaccacagatctgggcggaatggttggggttcaagacctgggaccgtatgctgcgaac
aacctgcagtgctggactctggtgatgggattcacattcaatctactccagatgatgctg
cactatgcacctcagaagggaggggaatccccggtggatgcttggccaggtctaccggcc
gtgcgtcttgtcctgggctggatctacctgcagccagccatctttgatgatcctgtactc
tccaacaagactggggtatggagcaagcttggtcgtgtgctaacatccctccaagtagat
gcctcaccccaggtagatgattctaccagctctctacccctccctgaagacaatcttctt
gatgggttctcaccacaacaggagtttcaaagggatctcgactttggtaagaacaagcga
caaggttggaatcggaatgctatcaaccaggagagaagtcagagactaagcagtcaggga
aagtggcttgctcatcaccaaccaagtctgctcaaagtcgagacaaacccctcaaacaag
cttgtctttacaagtcctctgggagatgatgtaacgtcacggagatcctctcatcaccaa
cagagacaacagagggcagcaaaggcagctactaacatcaaaggtacagagacatcatcc
agagtggcatcgatagagaaagacactcccaagaagattgcaggagcgcataggaaagat
ggaagcagagacagaggaagtgaagagaaccatagcaagacaatagctgttcaggcaata
atgtcaaggcccaacagtgatgtgaataagcctacagcgatctttaaaggtcaaggtcaa
gaaagaacgactggtcaaggaagcagctcaaagtcctccaagtctccgagcagtggaacc
accaaagacttggaaggatccaagcgccatgtccaatggcagaaccctccccatgccttt
gcccaggagcctgcatcttactaccctccaaaaccacaccctacctctcagccccacccg
aatgcacaaccacaccttggaccgggagctgcacaaccggggcagcaaccccaggctcca
ggcctcgcccctgccccacgacaccctcctccatcaggcccatatccccaacaagggggc
caacagcgcctcccacacccctatggtcacccaccccctccaggccctccaccacctggt
gttcctccaccctctatgggcatgcccccgcccgatcaaatgtaccctccaccacacatg
ggtcccccaccgtcgttcaatcctagctcccagaatgccccgcccagggcgatgcaccct
ccccctcccagaccaatgggtccccctccaatgccccacatggcacccccaggatggcag
cagcctcatagggatgtcagcagggatggacaaccaacacatcttccaagagatggccca
ccttcgccacgaggagtacctcctcatatgcaaccacctaaggtccagattccaccaccg
atgccccaaggaacccaaatgtcccccaattctaacatgccccagccaccgggccacccc
caccaccagggcagttggccgaccaggcctggtccaatgcccactgttggagagcggcaa
gaagaccatcctacaggtgacaccatgtccaacatcagcatgtggaatgcagccatgcag
gacaaactaacccatgcccacatgcagaggggtggaccgccagacatgcaacagtaccag
caacaagggcagcaaggcatgggaagggatacaagccctatgcgtagccccatcgacaac
tccacacaattcaggctgtctccttcggtggaggactttggtcaagggccagtgcaggct
aaccaacccccaagaaggatgtccaaccctacagaaatgcagatgcagggctttgggcca
aaccaaaactttgatcagggtcggatgaactacatgccatccatggccaagccgcatgag
catcaagttcgtatgcagccgcagcagaagcagcagcaacagccaagcggaggaccccct
ccgcagatcctagacaaccaaggtgccaatctccttgagttgcttgcgaagatgcagcgg
cagattgttccagagaatcccatcggcagtggcagcagcagaaccaagatgcgctattct
cccgaagagcactctgtggactccttccgtgccaacttggacaaccccagtatccagcag
aagaatctcagagatcctccaggattccgcaatgcctcggagaggttctatgatgatcag
ctggccaagaacaacgggaggtctggtgggccggattactacagcatgcagcaaggggac
cagaggggcatgatagggtacaacccacttagcaacaagtcccagggagggtcagcattc
aggaaggtgcaaccacagcagcctgatcgagaagactcattgtttccccagtcagacttg
gaatccaaaggctccagatcatacgagccaggggatcctttttcattcttcacaggatct
tcaaatcagcaggagaagcagcagcattctcagcggcagcagcttttgggtggggacatc
tttgggcaggagtcagggttgcaggaaccaacacaatctttccaatacaggagatcctct
ggaggactgtatgaaaactccacccctggctttacgtcctcccaaccccaaacatctggc
tcggataacacctggagaatggagaacagagaggatggcaaccagcatctccgtggtatc
ttccctggtcccaaagcaggaggaggagcaggagggactggaggtagtggtgctggtagc
agtgctggtaggagggggtcagaggagatgacgtctgctggttataacgctcgttggacg
ggcgacgcccaggagcagatggcgggtgagggcaccagacgcccttcccaggatgcattg
tttaatcagatgaactctggaggcagtggtctgttccaacgggaatcatacatggaacag
gaaccctcggcaccctaccctacaccacagcatcaccagtcaactacatccaagaacagc
tacttctctggtagtgctttgaaagggaagcagtccgatgaagagaatgctttctctagc
agtggcagtagctattccctcttcagctcaccctccccctggtcatctagacaagaagaa
gatggaggaggaatgagtaagtctggagagggtcttgggagtacactggggctcaaatgg
agagagcctcagctatcaagctcaccaaccagcagcttgctgccagagaggatacagagt
atctggtccagcccaatgcgctccgagcagtcacccctggagaagatcctaggccacacg
gtaagcctggaacaacagaagcccgacacgtga
DBGET
integrated database retrieval system
