KEGG   Strongylocentrotus purpuratus (purple sea urchin): 100892716
Entry
100892716         CDS       T01019                                 
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03420  Nucleotide excision repair
spu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100892716
  09124 Replication and repair
   03420 Nucleotide excision repair
    100892716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spu04121]
    100892716
   03400 DNA repair and recombination proteins [BR:spu03400]
    100892716
Ubiquitin system [BR:spu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100892716
DNA repair and recombination proteins [BR:spu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100892716
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Vps41 NBCH_WD40
Other DBs
NCBI-GeneID: 100892716
NCBI-ProteinID: XP_030837488
UniProt: A0A7M7NJM0
LinkDB
Position
Unknown
AA seq 542 aa
MAPTSSRNKKDKTAGSASEEKVTKSGKRTTRAAAAVSGRRTRQQRKKVGETDSDTEDFED
QIIKSGRSTTADRQRNRSTPDATTSSNLSNGAVKKQKLDVEEKENEEAIIIRGSRESVSP
SITPMDLLSSNIVHRIFRHTTGQRFKQSLRQATIQPFVQQLSEFRVSHGASPFERRVTAL
EWHPKHPTMLAVGSKGGDLMLWDYSKGQDGWNVVQGIGKGGSVQALRYDLSDPSWIFTSS
IDGMVSRLSFDGQPKKIYLNTNDWNHWYCSVDINYTDSVLTAGDNNGNVVLMSRQGEEMW
KYRLHKQKVTHCEFNRRCPWLLATASTDKTVKMWDIRNVSSKTSYIYQMNHERPINSAYF
SPDGTKLLTTDQHSHLRIYSGPMWDTLERTIIHPHRFFQHLTPIKATWHPFQNLIVVGRY
PDATLEGFEHDTVRSIDAYDVSSGELVCRLMDQCATGIQSLNVFNPSGDALATGMGLNTL
IWQNADIRSQVREEQREIMRRQGKDPPPDEGPSKKKAPKRHRSNNQKLTQKLQVMKKAKN
SR
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggcaccaacctcatcaagaaacaagaaagacaagactgcaggcagtgcatcagaagaa
aaagtaacaaaatctggcaaaagaacaaccagagctgcagctgcagtgagtggaaggcgg
actagacagcaaaggaagaaagttggagaaactgatagtgatacagaagattttgaagac
caaattattaaatctggcagatcaacaacggcagatagacagaggaatagatccactcct
gatgcaactacaagttcaaacctgtcaaatggagcggtgaagaagcagaagctggatgtg
gaggagaaagaaaatgaagaagccatcatcatcagaggaagcagagagtctgtgagtccc
tccatcacccctatggatctattaagctccaacatagttcatcggatcttcagacatacc
acagggcagaggttcaaacaaagcctgagacaggctaccattcaaccatttgtccaacag
ctctcagagttcagggttagccacggagcaagcccttttgaaaggagagtgacggctctt
gaatggcacccaaagcatcccacaatgcttgctgtggggtcaaagggcggtgacctcatg
ctgtgggattacagcaaagggcaagatggatggaatgttgtgcaaggaattggtaagggg
ggctcagtccaagccctgaggtatgacctttctgacccctcctggatattcacttcctct
atcgatggtatggttagtcgtctcagctttgatggccagccgaagaagatttacctcaat
accaatgactggaatcactggtactgttctgtagatatcaactatacagacagtgtgcta
acagcaggagataacaacggcaatgtggtactcatgtctcggcaaggagaagagatgtgg
aagtacagactgcacaagcagaaggtcacccactgcgagttcaaccgacgatgcccctgg
ctcctagcaaccgcatccacagacaagactgtcaagatgtgggacatcagaaacgtctcc
agcaaaaccagctacatctaccagatgaaccatgaaagaccaatcaattcagcatatttc
agtccagatgggactaagctcctaacaacagaccagcatagccacttgagaatctattct
ggtccaatgtgggatacactagagagaaccatcattcatcctcacaggttctttcagcat
ctcacaccaatcaaggctacttggcacccattccagaacctaatcgtagttggcagatat
cctgatgcgaccctagagggatttgaacatgacacggtgcgatcaatagatgcttacgat
gtcagctctggagagttggtgtgcaggctgatggaccaatgtgccaccggcatccaatct
ctgaatgtattcaatccaagtggagatgcattagcaacagggatgggactcaacacattg
atctggcagaacgcagacatccgatcccaagtgagggaggagcaacgagagatcatgagg
agacaaggaaaggaccctcccccagacgagggcccctccaagaagaaagcccccaagaga
caccgaagcaacaatcagaaactgacgcagaaactccaagtcatgaagaaagcgaagaat
agcaggtga

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