Strongylocentrotus purpuratus (purple sea urchin): 100893055
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Entry
100893055 CDS
T01019
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03030
DNA replication
spu03410
Base excision repair
spu03420
Nucleotide excision repair
spu03430
Mismatch repair
spu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100893055
03410 Base excision repair
100893055
03420 Nucleotide excision repair
100893055
03430 Mismatch repair
100893055
03440 Homologous recombination
100893055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spu03032
]
100893055
03400 DNA repair and recombination proteins [BR:
spu03400
]
100893055
Enzymes [BR:
spu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100893055
DNA replication proteins [BR:
spu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
100893055
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
100893055
MMR (mismatch excision repair)
DNA polymerase delta complex
100893055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
RNR-II_ins_dom
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
100893055
NCBI-ProteinID:
XP_030845110
UniProt:
A0A7M7P344
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MDSKRKPGGTPRGSQAKRARVQDFEDQDPSVFEEELALMEQIESESQGTNGSDQGSAPLP
SSDPKSQSKHPKWPRPPLAPIDPSKDSIVFQQIDLEHYIGSHIQGMPGATSGPTPIIRMF
GVTEAGNSVLCHIHGFTPYFYIPAPQNFVPEHCSKFRMCVNDAVLADMRSNKDNLTQAVL
AVDVMQKENIYGFHGNKMMPFLKITMAYPKLIAPARRLLEAGLSVPPYPHRGYQTYESNI
DFEIRFMVDADVVGCNWIEVPAGTYRVRSSSGHAPTSVSQIEIDVAWDRFISHPPDGQWE
KVAPFRILSFDIECAGRKGIFPEAEKDPVIQIANMVIRQGERDPFIRNIFTLNTCAPIVG
SQVMSFKTEHEMLQAWANFVREIDPDILTGYNIQNFDIPYLINRAAALRLSRFPFLGRLK
NTKSVIRDVSFQSKQLGKRENKSVNMEGRVQFDLLQVVVRDYKLRSYRLNAVSYHFLQEQ
KEDVQHSIITDLQNGNEQTRRRLAVYCLKDAMLPLRLLDKLMSVINYMEMARVTGVPLTY
LLSRGQQIKVVSQLLRKAKEQDLVMPAHKVETGDDFVGGYVLDPIRGYYDCPIATLDFSS
LYPSIMQAHNLCYTTLLSPSMKENLAPDQYIKTPTGNYFVKKSIRRGILPEILEDLLTAR
KRAKADLKKETDPLRKRVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSTTAFGRMM
IDKTRQLVETRYTVENGYKTTSKVIYGDTDSVMVKFGVKTVAESMELGKEAAAWISDEFP
PPIKLEFEKVYFPYLLINKKRYAGLYFTKPDTYDKMDCKGIETVRRDSCPLVSNVLNNVL
QKILIERDPTGALDHTKQTISDLLCNRIDISQLVITKELTKTGEEYAGRQAHVELAARMK
KRDPGSAPTLGDRVPYVIIAKAKGAAAYEKSEDPIYVLENNIPIDTTYYLENQLKGPLLR
IFEPVVGENKVEQVLLKGDHTRAKTQVTSKIGGLMAFAKVRSKCLGCKMGMDKDGVALCK
FCKPNESSIYQKEISQLAALEEKFGRLWTQCQRCQGSLHEDILCTSRDCPIFYMRKKVQK
DLADQDGLIKRFGNPCW
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggattctaaacgcaaaccaggaggcacccctcgcgggtctcaggcaaagagggccagg
gtccaggactttgaggaccaggacccgtcggtatttgaggaagagctggccttgatggag
cagatcgagtccgagtcccaagggaccaacggatcagaccaaggatcagcgccgttgcca
agcagtgatcctaaatcacagagtaagcatcctaaatggcctcgtcctccgttggctcct
atcgacccctcaaaggactccattgttttccagcaaattgatctcgagcattatattgga
tctcacatccagggcatgcccggcgctacgtcaggcccgacgccgatcatccgaatgttc
ggcgtgaccgaggcgggaaacagtgtcctgtgccacatccacgggttcacgccctacttc
tacatccccgccccgcagaacttcgtccccgagcactgctccaagttcaggatgtgtgtc
aacgatgctgtcctagccgacatgaggtcaaacaaggacaacttgacccaggctgtcttg
gccgtggatgtcatgcagaaagaaaatatctatggtttccatggaaacaagatgatgcct
ttcctgaagatcaccatggcataccctaagctgatagccccagctaggagactcctagag
gcggggctatcggtcccaccgtacccgcacaggggctaccagacctatgagagtaacatt
gactttgagatcaggtttatggtcgacgcagatgtcgttggttgcaactggatcgaagta
cctgcaggaacctaccgcgttcgctcatcctccggtcatgcccccacgtcggtgtcacag
atcgagatcgacgttgcttgggatcgcttcatcagtcatccccccgacggccagtgggag
aaagtggcaccgttcaggattctgagttttgatatcgagtgcgcggggcggaaaggtatt
ttcccagaagccgagaaggatcccgtcatccagattgccaacatggtgattcggcaggga
gagagagatccgttcattagaaacatctttactctcaacacgtgcgcccccattgtcggc
tcccaagtcatgtctttcaagacggaacacgagatgcttcaggcatgggccaactttgtc
cgagagatagaccccgacatcctgacgggttacaacatccaaaactttgatatcccgtac
ctgatcaaccgtgctgctgccctcagactgtcgcgcttcccgttcctcggacgtctcaag
aacaccaagagtgtgatcagggacgtctcgttccagtccaagcagctcggcaagcgagag
aacaagtccgtcaacatggaaggtcgtgtgcagtttgatcttcttcaggtggttgtgagg
gattacaagctgaggtcatatcgtctaaacgccgtcagttaccacttcctccaagagcag
aaagaagacgttcaacattccatcatcacagaccttcagaatggcaatgaacagacgaga
aggcgattggccgtctactgtttgaaagatgccatgctgcctctgcgtctccttgacaag
ctcatgtccgtcatcaactacatggagatggcgagggtgacgggcgtgcctctcacctat
ctgctctccagagggcagcagatcaaggttgtctcacagcttctaagaaaggctaaggaa
caggacctggtgatgcctgcccacaaagtagagacgggagatgactttgtcggaggttac
gtcttggatccaatcagagggtactatgactgtcccatcgctacgctggatttctcttcc
ctatacccatccatcatgcaggcacataacctctgctatacaacgctcttatcaccgtct
atgaaagagaaccttgcacctgatcagtacatcaagacgccaacagggaactacttcgtc
aagaagtcgataaggcgaggcatcctgccagagattcttgaagacctactgacagctaga
aaaagagccaaggctgatctgaagaaagaaaccgacccactgcgcaagagagtgttggat
ggccgtcagttggcgctcaaggtcagcgccaactccgtctacggtttcaccggagcgcag
gtcggcaagctgccatgtctggagatctcgcagagcacgacggccttcgggaggatgatg
atcgataagacgagacagctggtggagactagatacacagtggagaacgggtacaagact
acttcaaaggttatctatggagacactgactcggtaatggtgaagtttggtgtcaagacc
gtagcagagagtatggagctaggtaaagaggctgccgcatggatctcagacgagttccca
ccgcccatcaaactagagtttgaaaaggtctactttccgtacctactgattaacaagaag
cgctatgcaggtctctacttcaccaaaccagacacctacgacaagatggactgcaaggga
atcgagacggtccgcagagacagctgccctctcgtgtccaacgtcttgaataacgtcctt
cagaagatcctcattgaaagagatccgacgggagcgttggaccacaccaagcagacgatc
tctgatctcctatgtaaccgcatcgacatctcacagcttgtgatcaccaaggagctgact
aagacaggggaggagtacgctggaagacaggctcatgttgaactagccgcaaggatgaag
aagagggacccaggaagtgccccaaccctaggagaccgtgttccttacgtcatcatcgca
aaggcaaaaggagctgcagcatatgaaaagtcagaggatcccatctatgtacttgagaac
aacattccaattgacaccacgtactacctggagaatcagctgaaagggcctctgcttcgg
atcttcgagcctgtcgtaggggaaaacaaagtagaacaagtgttactgaagggggaccac
acccgagctaagacacaggtaacctccaagatcggcggtctcatggcgttcgcaaaggtg
aggagcaagtgcctgggatgtaagatggggatggacaaggatggggtcgctctctgcaag
ttctgcaaacccaacgaatcgtccatctaccagaaagagatcagccagctagccgcttta
gaggagaagtttggacgtctctggacccagtgtcaacgatgccagggcagtctccatgaa
gacatcctatgtaccagtcgtgactgtcccatcttctacatgcgtaagaaagtacagaag
gaccttgctgatcaagacggtctcatcaagaggtttggtaacccatgctggtga
DBGET
integrated database retrieval system
