Strongylocentrotus purpuratus (purple sea urchin): 100893415
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Entry
100893415 CDS
T01019
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spu01009
]
100893415
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
100893415
04131 Membrane trafficking [BR:
spu04131
]
100893415
03036 Chromosome and associated proteins [BR:
spu03036
]
100893415
Enzymes [BR:
spu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100893415
Protein phosphatases and associated proteins [BR:
spu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100893415
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100893415
Membrane trafficking [BR:
spu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100893415
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100893415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
100893415
NCBI-ProteinID:
XP_011670202
UniProt:
A0A7M7LVZ6
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MADSDSPQEGAKGSGPSVRRKQTEKPSSVAPKGTEKPKSAQQNGSRRGKKSTKAARSEQR
AALRAAKKKGKEREEQGDGDIDVYMADLVLDDSPPPRPTGTGLVYDDRFKEHYCPIGSEH
GKSECPERLAACMEKLQAGGLVDRCTRVSARPASDEEILSLHSQEYLDTLKRSGTLSPDE
LKELAQSYDSVFLCNESFEIARLAVGGLLELTEKVVKGELRNGFAFIRPCGHHSQRDIAN
GYSLVNNIALTAKIARTKLNVERILIVDWDVHHGQGIQYLTQDDPSIMYFSMHRYENTSF
WPHLEASNYDHIGEGAGKGYNVNVPWNKIGMGDAEYLTVFQQLLLPLAYEFNPQLVLVSA
GFDAAEGDPKGEMCISPDGFAHMTHHLMGLAQGKVVLGLEGGYSLEALGKSAAMCTKTLL
GDLPNPLSQIKHVSDNALETIHNVTKALKPYWKCFQCDVNIACKEEPIQSEDVSSTTPDV
PPPPWDDAAGKAGVGEVTGRLLKELMLSSPPNRTGFVYDERMKLHRTFDHPERPERIARI
YSKHQEHGLIDRCIKLETREATAEELETCHLADMIGDIKETSKHTARELIDIQDKFNSTR
YSRDIYVHPDTYLSASVAAGCTLNLVDAVLSNQVLNAVGIVRPPGHHADSKLASGFCFFN
NVAIASKYAQNKYGVKRVLIVDWDVHHGNGTQRLFESDPSVLYISLHRHENGMYFPMGPE
GAVDQVGKGDGQGYNVNIGWNTGNKGLMGDAEYLAAFHHIIMPLAYQFNPELVFISAGFD
AAKGDPLGNCLVSPEGYGHMTHMLSSIAGGRVITVLEGGYNLNSIAVSMAMCTRIMLGDP
CPDLSPGIPSSCGMQAIYDAAKAHEKFWSSMKDQVGFLETMIFKEDESSTEDNDTIQTDS
TSSSNAAPRDAVTSEPSVPERVDEVSSTKAEASSAAGDGDGEDGLKDILEGMSGMNLQQP
REASVTTGGAGAGAKEDAVQTQDDVPEDEALGACGVSGETTTPGAEDQLFGSLQETFGPQ
VEMHAVIPQPWCPHLDSDVGPLPSTGLDVSLPCKDCGDTRENWVCLHCYQVYCGRYVNEH
MLMHGLESSHLMVLSYADLSAWCYGCDAYIHNEILIPAKRAAHLSKFGTPGV
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcagattccccacaagagggcgctaaggggagcggaccctcggtgagaaga
aaacaaaccgagaaaccttcgtctgtagctcctaaaggcacagagaaacccaagtcagcg
cagcagaatggaagtagacgtggaaagaaatcaacgaaagctgccagaagcgagcagaga
gcagctctccgggcggctaagaagaaaggaaaagaaagagaggaacaaggagatggtgat
atcgatgtttatatggctgatttggtactagatgattcccctccaccaagacctactggt
actggtctggtgtatgatgacaggttcaaggaacactattgccccattggaagtgagcat
gggaagagtgaatgtccagagagattagcagcatgcatggagaagctacaagctggaggg
ttggtggatagatgtacacgagtatcggcccgtcctgcctcagatgaggaaatactgagt
ttgcacagccaagagtacttagatactctgaagagatctggtactttatcaccggatgag
ctcaaggagcttgctcagagttacgactctgtctttctatgtaacgagagttttgagatt
gctcggctggctgttggtggactcctagaactgacagagaaagtggtgaaaggagagctc
aggaatggatttgcatttatcagaccttgtgggcaccatagccagcgggatattgccaat
ggatattctcttgtcaacaatattgctttgaccgctaaaatagctcggaccaagttgaac
gttgaaagaatcctgattgttgattgggatgtccatcatggtcaagggatccagtatctt
actcaagatgatccaagtatcatgtacttctccatgcatcgttatgagaacaccagcttc
tggcctcacctagaggcatctaactatgatcatattggagaaggtgctggaaaggggtac
aatgtcaatgtgccatggaacaagattggaatgggtgatgcggaataccttactgtcttt
caacagctgcttctacctctggcgtatgagttcaaccctcagctggtccttgtgtctgct
gggtttgatgcggctgaaggagatcctaagggtgagatgtgcataagtcctgatggtttt
gctcacatgacacaccacctgatggggttagcacagggcaaggtggtgttgggtttagaa
ggtggatacagcttagaagccctgggcaagtcagctgccatgtgcactaagacgcttctt
ggagatctacccaatcctctatcgcaaatcaaacacgtctctgataatgcattggaaacc
atacacaatgtgaccaaggccctaaagccctactggaagtgctttcaatgtgatgtaaac
atagcatgtaaagaggaacccatccagagtgaagacgtgagcagtacgaccccagatgta
cctcctcctccttgggatgatgcagcagggaaggctggtgtaggtgaggtcaccggtaga
ctcctcaaggaactcatgttgtcatcgcctcctaacaggactggatttgtttatgatgaa
cgaatgaaactacacagaaccttcgatcaccctgaacggcctgagagaatagctaggata
tacagcaaacatcaagaacatggactgatagatagatgtatcaaactagagacaagggaa
gctacagctgaagaattggaaacttgccatttagctgacatgattggagatatcaaagag
accagcaagcacacagccagagagctgattgatatccaggataagtttaattctactcgg
tatagcagagacatctatgttcatccagatacctacctgagtgcatcggtggctgcaggg
tgtactctcaaccttgtagatgctgtgctttcaaaccaggtcttgaatgcagttggaatt
gtaagaccaccaggccatcatgctgatagtaaactggcgtctggattctgcttcttcaac
aatgttgctatcgcttcaaaatatgctcagaacaagtatggtgtcaaaagagttttaatt
gttgactgggatgttcatcatggtaacggaactcagagactctttgagagtgacccctcg
gtgctctacatatcacttcatcggcatgagaatggtatgtactttcctatgggaccagag
ggggcggtagatcaagtaggaaaaggtgacggacagggctacaatgtcaacattggctgg
aatacaggtaacaagggcttaatgggagatgctgaatacctagctgcctttcatcatatc
atcatgcctctagcataccagttcaacccagagttagtcttcatttcagctggttttgat
gctgctaagggagacccactagggaattgcttggtatcgccggaaggctatggtcacatg
acccacatgcttagcagtatagctggagggcgtgtcatcactgtgttagagggagggtac
aacttgaactccatagctgtgtccatggcgatgtgtacccgcatcatgctgggtgaccca
tgtcccgacctttcacctggtatcccatcaagctgtgggatgcaagcaatctacgatgct
gccaaggctcatgagaagttttggtcatccatgaaagatcaagttggtttcttagagacg
atgatttttaaagaagatgaaagtagcactgaagataatgatacaattcaaacagactct
acctcttcttcaaatgctgcaccaagggatgcagtgacatcagagccgtcagttccagag
agagttgatgaggtttcatctaccaaagcagaagcctcatcagctgcaggtgacggtgac
ggtgaagatgggctcaaggatatcctggaaggaatgtcagggatgaatcttcagcagcca
agagaggcatctgtcaccacaggaggagcaggagcaggtgccaaggaagatgctgtgcaa
acacaagatgatgtccctgaggatgaagctctaggagcctgtggtgtatcaggtgaaaca
actacaccaggagcagaagatcaactctttggtagccttcaggagacattcggtcctcag
gttgagatgcatgccgtgatccctcagccatggtgccctcatctggactcggacgtagga
cccttgccctccaccggtctagacgtgtcgttgccctgcaaggattgtggtgatacgaga
gagaactgggtgtgtcttcattgttaccaggtctactgtggacgctatgtcaatgagcac
atgttaatgcatgggttggagtctagtcatctcatggtgcttagctatgctgacttgtct
gcttggtgctatggatgtgatgcgtatatacataatgagattctcataccagcaaagaga
gcagcacatctcagcaagtttggtactcctggagtgtag
DBGET
integrated database retrieval system
