Strongylocentrotus purpuratus (purple sea urchin): 105437990
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Entry
105437990 CDS
T01019
Name
(RefSeq) uncharacterized protein LOC105437990
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105437990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spu04121
]
105437990
03400 DNA repair and recombination proteins [BR:
spu03400
]
105437990
Ubiquitin system [BR:
spu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105437990
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105437990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
SAP
Motif
Other DBs
NCBI-GeneID:
105437990
NCBI-ProteinID:
XP_030836261
UniProt:
A0A7M7NGJ3
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MTVQCLAELAEEGLLDSTSMSSDKCGFIPQETAHRVDSPENRLSDDQLTLLEDLSSLVNS
PTMSDAVIQIDDGSKLHVHSFMIQLRCPALATLLAKPFGRKSTGLPSIVVSDMGYEAMEN
VLSYIYSATVNITNDTAVETHKFAERFEMADLASHCKPYLQDDTDSKITRKESELDIVDK
DLNQLIDSLWEDEEDDKEEKNRDAGRTSDDDVNDALDDDEIKEIYESSQRFRTIMLEDEE
LEDDSPFREFVHSSVSSPKNIENDGERMMDEEEKEEEELHKMMLTQGCRRGNTSSYCSRD
NSNSDGDNEDWSMAIDDEVVVQGEVNAQCVTPLAKRTTDERKDMIGENLNECTEDIVDET
PKETYHSRRRVSVSSSSTNETITDEHHHMSFEESHHSFLNQTLVCESNVSAISVTDRQKK
RKASPETSNISKGGSMGLECGDGVKVLHKRFLDAGVEHSESPDDEVLFLRMDSAESESDG
QNRTLEKSLQSVRETSLQVENSTGLNGKVQDRGFDDIDQGRLSSSRKKKLLIQQYSPQTD
SDDNRSPPEQVASHDGNEIQVVRIKESESGEIIDKIHRNSSVVLKKLSMTLKCNKLDKDG
ESRQKRLASQSSTENHDDRGFKKRQGSLDWSLSEDILSPSPPPSPKFSKASQIPRLEKMV
ESKRGPVSRNNHLGLDHSRSLKASPKIKAESLEEEEEDDPYQLSPSSSTSSRKGSKHPSS
SKRKKKMRVKRETPQRGNGSSLSSPSFESSASSKDTNRRWSSLKMDQDLPSCRSRDSFHC
EASPELMHDLSPSTSPPVLHRISPSPSFERSPPPGASSVPLHRISLSPSMERSSAPGASP
VPGASPAVSTSPSVSSRQSPYPAMQDMDEEPEERFAYDMEEGCGYNDFHVGMDHPNDEDD
DSDAGIAHQNEKSVKDGEGSHRIGEISEGIMTGSHQNEHFEEENEIDLTHEEEEKEDRLM
DDVHLPSSAFRDRSRDGSGFPMQVGHKEPEQKDEYNNIGTPHVKHYQRPLLGGGPGDGPK
GHRLSQSLTTTPRTSQSNAVSTGAVLKTPSISRLIRDEYYPPAPITPMPNYDSMMTPELK
KELKRYGVKPLGKKKAKLLLSEIYSYLHQVMPGDESDEDTSSTAMTKAEPEPSKGRSKKG
KATTKQKPATKRGKAQPKPREESSSDDRQFKETNNKKSNIQKKQTKPRKRKKAEGCLDET
PTKRVKTEIPLKERILDTARRGVETEDSTGLDEPVSSQGSHSSSIDSNKSDFGESIYYED
MEDEDDDVMETQQEQDMSTEVKRYIMRNKELHQKILHYEALNLEEFYKELKEAKVQCSKV
KLVEFLDHQCITFRGQGGSRQRKPKNTKTKTKTKR
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgcaatgcctggctgagctagcggaggaaggactgctagactcaacatctatg
tcatcagataaatgtgggtttattccacaggagacagctcacagggtggacagcccagag
aatcggctgagtgatgaccagttgaccctcttagaagatctgtctagtttagtgaactca
cccactatgagtgatgctgtcatacagatagatgatggcagtaaacttcatgtgcatagc
ttcatgatccaactgagatgccccgccttagcaacgcttctggctaaaccatttgggaga
aaaagcaccggccttccatccattgttgtgagtgatatgggctatgaagcaatggagaac
gttctgagttatatttattcagccactgtcaatattaccaatgatacagcagtcgaaacc
cacaaattcgctgaaagatttgaaatggccgatttagcctcacactgcaagccatatctt
caggatgacactgactctaagataacacggaaagaaagtgagctggacattgtggataaa
gacctcaaccaactcatcgacagtctgtgggaagatgaagaagatgacaaggaggagaaa
aatagagatgctggtagaacgtcggatgatgacgtgaatgatgccctcgacgatgatgag
atcaaagagatttatgagtcatcccaacgattcaggacgataatgttggaagatgaggag
ttggaggatgattccccctttagggaatttgtccactctagtgtcagcagcccgaagaat
atcgagaatgatggtgaaaggatgatggatgaggaggagaaggaggaggaggagcttcac
aagatgatgttgacacaagggtgtagacggggtaataccagtagttactgttcccgtgac
aacagcaatagtgatggtgataatgaggattggagcatggcaatagatgatgaagtggta
gtacaaggtgaagtaaatgcccaatgcgtgacccccttagcaaagaggactactgatgaa
aggaaagatatgattggagagaacttaaatgagtgtactgaagacatcgttgatgaaact
ccaaaggaaacatatcatagcagaaggagggtcagtgttagttcctcatcaacaaatgaa
acaattactgatgaacatcatcatatgtcgtttgaggaaagtcatcattctttcttaaat
cagacactagtgtgtgagagtaatgtcagtgcaatatccgtgacggaccgtcagaagaaa
aggaaggcatccccagagacttcaaacatatctaagggtggcagtatgggtttagaatgt
ggtgatggggtcaaagttttgcataagcgctttttggatgctggtgtagagcactcagag
agtcctgatgacgaagtactattccttcggatggattctgcagaatctgagagtgatggg
cagaacagaactttggagaagagtctgcaaagtgtacgggaaacaagtttacaggtagaa
aatagtacagggttgaacggtaaggtccaagatcgtggctttgatgacattgatcaaggg
agattaagttcttcaaggaaaaagaaactgttgatacagcaatactctccacagactgat
tctgatgataatcgctcaccaccagagcaagtagcatctcatgatgggaatgagatacaa
gtggttaggataaaggaatcagagtctggagaaatcatagataagatccatcgtaactct
tcagtagttcttaagaaactctccatgaccttaaagtgtaataagcttgataaagatggc
gaatcaaggcagaaaaggcttgcatcgcagtcatcaacagaaaaccatgatgatcgagga
ttcaaaaaaagacaagggtccttagattggagtctctctgaagatattctatctccatca
ccaccaccatcgcccaaattttccaaggcatctcagattccaaggttggagaaaatggta
gagagtaaaagaggtccagtcagcagaaataatcatttaggattggatcacagcaggagt
ttgaaagcatccccgaagatcaaagcagagagccttgaggaggaggaggaggatgatcca
taccaactctctccatcatcttcaacttcttcaagaaaagggagcaagcatccatcctct
tccaagcgcaagaagaaaatgagggttaaaagagaaaccccgcaacgtgggaatggcagc
agcttgtctagcccttcctttgaatccagtgcaagctccaaagacactaacagaagatgg
tccagtctaaagatggaccaggatcttccctcctgcagatctagagactcgtttcattgt
gaagcatcacctgagctgatgcatgacttatctccttccacttctccacccgtattgcat
agaatatcaccgtctccttcctttgaaaggtctccacctcctggagcctcttctgttcca
ttgcatagaatatcactgtctccttccatggaaagatcttcagctcctggagcctctcct
gttccaggtgcttctcctgctgtatcaacatctccttcagtatcgtccaggcagtctcca
taccctgccatgcaggacatggatgaggagccagaagagagatttgcctatgacatggag
gagggatgcggttataatgacttccatgttgggatggatcatccaaatgatgaggatgat
gatagtgatgcaggaattgcacaccagaatgagaagtccgtgaaagatggggaagggtct
cacagaattggtgaaataagtgaaggcattatgactgggagtcatcaaaatgaacacttt
gaagaagaaaatgaaattgacttaacacatgaggaggaggagaaggaagacagactcatg
gatgatgttcacctcccttcttcagccttcagagataggagtcgtgatggtagtggtttt
ccaatgcaagttggtcacaaagagcctgaacagaaagatgaatataacaatatcggaacc
ccacatgtcaaacattatcagagaccacttttaggaggaggaccaggagatggaccaaaa
ggtcatagactttctcaatcattgacaacaacccctagaacttcacagtcaaacgcagtc
tccacaggtgctgttctgaagacaccgtcgatatcccgtctgataagagacgagtattac
cctccagctccaatcaccccgatgcccaactatgactctatgatgactccagaactcaag
aaagagctgaagaggtatggagttaagcccctaggtaaaaagaaggccaagctactactg
tctgaaatatattcttatttacatcaagtcatgccaggagatgaatccgatgaagacaca
tcatccaccgccatgaccaaagcagagccggaaccatccaagggaagatctaaaaaggga
aaggccacaacaaagcagaaaccagcaacaaagagaggcaaagctcagccaaagccaagg
gaggagtcttcatccgatgatagacaattcaaggaaacgaacaataagaaatccaatatc
cagaagaagcagactaagccaaggaaacgcaagaaagcagagggatgtctggacgagaca
ccgacgaagagggtgaagacggagatacctttgaaggagaggatcctggatactgccagg
aggggcgtagaaacagaggatagcacaggcttggatgagccagtgtctagccaaggtagt
catagctcaagtattgatagtaataagagtgactttggagaaagcatttactatgaggac
atggaagatgaagatgacgatgtcatggaaacacaacaggaacaagatatgtccaccgag
gtaaagagatatatcatgaggaataaggagctacatcagaagatcctccactatgaggcg
ttgaatctggaagagttttacaaagaactgaaagaagcaaaagtacagtgttctaaagtc
aagcttgtggagtttctagatcatcaatgtatcacctttcgaggccaaggaggcagtcga
cagcgcaaaccaaagaataccaagaccaagaccaagaccaagagataa
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integrated database retrieval system
