Strongylocentrotus purpuratus (purple sea urchin): 105438529
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Entry
105438529 CDS
T01019
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105438529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
105438529
03041 Spliceosome [BR:
spu03041
]
105438529
03032 DNA replication proteins [BR:
spu03032
]
105438529
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105438529
Spliceosome [BR:
spu03041
]
Complex A
U1 snRNP components
Sm proteins
105438529
U2 snRNP components
105438529
Complex B
U1 snRNP components
105438529
U4/U6.U5 tri-snRNP components
105438529
Complex C
U2 snRNP components
105438529
DNA replication proteins [BR:
spu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105438529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
105438529
NCBI-ProteinID:
XP_030847427
UniProt:
W4Z7B1
LinkDB
All DBs
Position
Unknown
AA seq
134 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMMHITVTYRDGRVAQLEH
VYIRGSKIRFFILPDMLKNAPMFKKAGSKGSAGRGKSAILRAQVAAGGRGGRGRGGGRGG
DGGRGRGNVFQRRR
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgtctattggtgtgcctattaaggttttgcatgaggcagagggacatatcatcacctgt
gagacaaatacaggtgaagtataccgtggaaagctcatcgaagctgaagataacatgaac
tgccaaatgatgcacataactgtcacatatcgcgatggacgagtcgcgcagttggaacat
gtttacattaggggaagtaaaattagatttttcattttacctgacatgctgaagaatgct
ccaatgttcaagaaagccggatcaaaggggtctgcaggacgtggaaaatctgccattctg
agagcacaggttgctgcaggaggtcgaggaggaagaggacgcgggggtggacgtggtggt
gatggagggcgaggaagaggaaacgtctttcaaaggaggagatga
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integrated database retrieval system
