Strongylocentrotus purpuratus (purple sea urchin): 105439037
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Entry
105439037 CDS
T01019
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105439037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
105439037
03009 Ribosome biogenesis [BR:
spu03009
]
105439037
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105439037
Spliceosome [BR:
spu03041
]
Complex A
U2 snRNP components
U2 related factors
105439037
Complex B
105439037
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105439037
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
90S particles
Helicases
105439037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
nSTAND3
AAA_19
AAA_7
SRP54
ResIII
Flavi_DEAD
TsaE
AAA
ABC_tran
NB-ARC
AAA_25
T2SSE
PhoH
AAA_29
Motif
Other DBs
NCBI-GeneID:
105439037
NCBI-ProteinID:
XP_030841495
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MSKRRLDIDDSYSKRKGESDYRDRDRDREKRDRDDDRGDRDRDRRDRDRDKTRWESAGVT
SAPMSIPTSTVAINPLSLTPYSQRYFTILAKRKTLPVWEYKDKFMQMLEEQKIIVLVGET
GSGKTTQIPQWCMEYVRKKFPVNSMKIVACTQPRRVAAMSVAQRVADEVDVVLGQEVGYS
IRFEDCTSNKTLVKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVE
KQRSDLKLVVMSATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVV
QIHMCEEVEGDVLLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRI
FEHAPPNKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSP
ISKASAQQRAGRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGID
DLVHFDFMDPPAPETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTD
YSCSNEILSVTAMLSVPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNED
PQWCYDNFIQYRSLKSADSVRQQLARIMDRFALQRTSTNFNSKDYYLNIRKALVNGFFMQ
VAHLERTGHYLTVKDNQVVQLHPSTCLDHKPEWVLYNEFVLTTKNYVRTVTDIKADWLMR
LAPQYYDMPNFPQCEAKRILEKIAMKIQGC
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagacgtttagatatcgatgattcatacagtaaaaggaagggagagtcagac
tatagagacagggatcgagacagagaaaagagggacagagatgacgatagaggggaccgg
gatcgtgacagaagagatcgtgacagagataaaacgcgatgggagtctgcgggggtcacg
agtgcccccatgtccatcccaacctctaccgtggccatcaaccccttgagcctcacacct
tactcacaaagatacttcaccattctagccaagaggaaaacactgccagtatgggagtac
aaagacaagtttatgcaaatgctagaagaacagaagattattgtgcttgtaggagagact
gggtctggtaaaacaacacaaatccctcaatggtgcatggagtatgtgaggaagaagttc
cctgtgaattctatgaagattgttgcttgcacccagccgaggagagtggctgctatgagt
gtagcccagcgtgtagcagatgaggtcgatgtcgtcctgggtcaagaggtcggatacagc
atcaggtttgaagactgcacatcgaacaagacgctggtcaaatacatgactgacggtatg
ttgctgagggaaggtatgactgatcccttgttggagaggtatggggtgatcctgctcgat
gaggcccatgaacgtaccgtagctacagacatcctgatgggtctgcttaaagaggtggag
aaacagagatcagatctcaaactcgtcgtcatgagtgctacccttgatgccggaaaattc
cagcattattttgacaatgcccctctgatgactgtccctggacgtacccatcctgtagag
atcttctacaccccagagccagagagagactacctggaggcagctatacgtaccgtcgtt
cagattcatatgtgtgaggaggtggagggagatgtccttctcttcttgactggtcaggag
gaaatagaagaggcgtgtaaacgtatcaaacgagaggtagacaacctgggtcctgaggta
ggggacctgaagaccatccctctctactccaccctcccccctgccatgcagcagaggatc
tttgagcatgccccgcccaacaaggccaacggagccatcggtcgcaaggtggtggtctcc
accaacattgctgagacatcgctgaccatcgatggcgtcgtgtttgtgattgatcctgga
ttcgcaaagcaaaaggtgtacaaccctcgtatcagggtggagtctctgctggtgtcgccc
atcagtaaagccagtgcccagcagagggctggacgtgctggccgtacgcgtccaggcaag
tgtttccgcctctacactgagaaggcctatgatagcgagatgcaggacaacacatatcca
gagatcctgagatccaatctgggtaccgtggtgttgcagctcaagaagctgggtatcgat
gatctggttcattttgactttatggaccctccagcccctgagactttgatgagagcccta
gaactgctcaactacctgggtgccctggatgacagtggtgaccttacccgcctggggtca
atgatggccgagttccctctcgatcctcagctggccaagatggtcatcgccagcactgac
tacagctgctccaatgagatcctctctgtcacagctatgttatcagtcccacagtgcttc
ctgcgaccgaacgaggccaagaagctcgctgacgaggctaagatgaggttcgctcatatc
gacggcgatcacctgacgctactcaacgtctaccatgccttcaagcagaacaatgaggac
cctcagtggtgctacgataacttcatccagtaccgatccctgaagtcagcggacagtgta
cggcagcagctggctaggatcatggaccgcttcgctctacaaaggaccagcacaaacttc
aacagcaaggactactacctgaacatccgcaaggctctagtcaatggattcttcatgcag
gttgctcacttggaaaggactggtcactatctgacggtcaaggataaccaggttgtccag
cttcatccatccacctgtcttgaccataagcctgaatgggttctctacaatgagtttgta
ctgaccactaagaactacgtccgaacagtcacagatatcaaggcagactggttgatgcgt
ctcgctccccaatactatgacatgcccaacttcccccagtgcgaagccaagaggatattg
gagaaaatcgccatgaagatacaaggatgctag
DBGET
integrated database retrieval system
