Strongylocentrotus purpuratus (purple sea urchin): 105444553
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Entry
105444553 CDS
T01019
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03022
Basal transcription factors
spu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105444553
09124 Replication and repair
03420 Nucleotide excision repair
105444553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
105444553
03400 DNA repair and recombination proteins [BR:
spu03400
]
105444553
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105444553
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105444553
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105444553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
CCDC92
CSTF_C
Motif
Other DBs
NCBI-GeneID:
105444553
NCBI-ProteinID:
XP_030829928
UniProt:
A0A7M7STB7
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MGKRDRKDVESKKSKKYRTESPELENDDTQGPDGTYIPKNASRQVEDQDAGDEDEFGAKD
YRGQMELKKDHGSRPLWLAPDGHIFLESFSPVYKHAHDFLIAISEPVCRPENIHEYKLTA
YSLYAAVSVGLQTSDIIEYLRRLSKTTIPNGIVEFIKLCTLSYGKVKLVLKHNRYFVESP
FPDVLQKLLKDSVVQQCRLRSDVDEEANEDGFLVSQRAAGGSSVLKLNAPNSKGKPNEAS
DSKDAEGGDGGGGETEKIPTDIFDFYDKIDKEDEDGDDLTAVSFEVVQDEIENLQKRCIE
LEYPLLAEYDFRNDTRNPDLSIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGK
TLVGVTASCTVRKRCMVLCTSGVAVEQWRSQFRMWSTVDDSMICRFTSDAKDKPMGCSIC
ISTYSMVAHSTKRSWEADQVMQWLQSQEWGLMILDEVHTIPAKQFRRVLTQVQAHCKLGL
TATLVREDDKIADLNFLIGPKLYEANWMELQNKGFIARVQCAEVWCPMAPEFFREYLAIR
TRRRLLLYVMNPNKFRACQFLVRFHEQRNDKVIVFSDNVFALKHYAIAMGRPYIYGPTSQ
GERMQILQNFQHNPAVSTIFISKVGDNSFDLPEANVLIQISSHGGSRRQEAQRLGRILRA
KKGSIAEEYNAFFYTLVSQDTQEMFYSLKRQRFLVNQGYSFKTITKLAGMEQENLKYSTK
QEQQQLLQQVLAATDADAEEEIVPGDLKTGSRVVRRVGNMSSMSGADDQVYMEYQSKNKS
VHPLFKKFRR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgggatcgtaaagacgttgaatccaagaaatccaagaagtatagaacagag
tctcctgaattagaaaatgatgacacacaaggacctgatggtacatacattcctaagaat
gccagtcgccaggtagaggaccaggatgctggagacgaggatgagttcggtgctaaagat
tatcgtggtcagatggaactcaagaaggaccatggttccagacctttgtggttggcacct
gatggacatatctttctagaatccttctcaccagtctacaaacatgctcatgacttcctt
atagcgatatcggaaccagtttgcagaccagaaaacatccatgagtacaaactgactgcg
tactccttgtatgctgcagtgtctgtaggtctacagaccagtgacatcatagaatacttg
agaagactaagcaagactactatccctaacggcattgtagaattcatcaagctttgtact
ctgagctatggcaaagtgaagctggtcctgaagcacaacagatactttgtagagagtcca
tttcctgatgtattacagaagcttttgaaggattcagttgtacagcagtgtcgtctgaga
tcagatgttgacgaagaagcaaatgaagatggctttcttgtatcacagagggcagcaggc
ggctcttctgtactcaagctgaatgcaccaaactccaaaggaaaacccaacgaagcatct
gattctaaggatgcagaaggaggagatggaggaggaggagaaacagagaagataccaacg
gatatctttgatttctacgataaaatagacaaggaagatgaagacggagacgatcttact
gccgtctcttttgaagtcgttcaagatgaaattgaaaacttgcaaaagagatgtattgag
ttagagtaccctctgttagccgagtacgacttcaggaatgacaccaggaatccggatctg
agcattgatttgaagccaactgccgtcctacgcccgtaccaagagaagagcttaaggaag
atgtttggtaatggcagagctaggtcaggggtcatcgtacttccatgtggtgctggcaag
acgttggtcggagtgactgcctcctgtacggtgaggaagcgttgtatggtgctctgtacg
tcaggagtagcagtagagcagtggagatctcagttcagaatgtggtctaccgtagatgat
tccatgatctgcaggtttacatcagatgctaaggataaacccatgggctgcagtatctgt
atcagtacatactccatggtcgcacattcgaccaagcgctcatgggaagcagatcaagtt
atgcagtggcttcaatctcaggagtggggactcatgatcttagacgaggtgcatacgatc
ccagccaagcagttccggcgggtcctgacccaggtccaggcccactgcaagctaggacta
acggctactctggtccgagaggatgacaagattgcagacctgaacttcttaatcggtccc
aagctctacgaggctaactggatggagctacagaacaaaggtttcattgccagagtacag
tgtgcggaggtctggtgccccatggctccagagttcttcagagagtacctggccatcagg
actaggagaagattgttgttgtatgtgatgaatccaaacaagttccgagcatgccagttc
ctggtgagatttcacgagcagcggaacgataaagtgatcgtcttctcagataacgtgttc
gctctcaagcactacgccatagccatggggagaccatatatctatgggcctaccagtcaa
ggggagcgaatgcagattctgcagaactttcaacacaaccctgctgtcagcacaatcttc
atctccaaagtaggtgacaattcctttgatctacctgaggccaacgtcttgatccagatt
tcatctcatggtggttctagaaggcaagaggctcaacgtctaggtcgtatcctcagagca
aagaaaggttccattgcagaggaatacaatgcgttcttctatacactggtctcacaagac
acccaagagatgttctattcactcaagagacaaagattccttgtcaatcaaggatatagc
ttcaagactatcaccaagctagctggcatggaacaggagaacctgaagtactccaccaaa
caggagcagcagcagctcttacagcaggtactagctgctactgacgctgatgcggaagaa
gaaatagtacctggagatctcaaaactggctctcgggtggttcgtcgtgtcggtaacatg
agctcaatgtccggtgctgatgatcaagtctacatggaataccagtcaaagaacaagagt
gtgcatccactcttcaagaaattcagaaggtga
DBGET
integrated database retrieval system
