Strongylocentrotus purpuratus (purple sea urchin): 115917878
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Entry
115917878 CDS
T01019
Name
(RefSeq) gliomedin-like
KO
K19719
collagen type II alpha
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04512
ECM-receptor interaction
spu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115917878
04518 Integrin signaling
115917878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spu00536
]
115917878
Glycosaminoglycan binding proteins [BR:
spu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115917878
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OLF
Collagen
Motif
Other DBs
NCBI-GeneID:
115917878
NCBI-ProteinID:
XP_030833077
UniProt:
A0A7M7N9A6
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MATDKQNECSCSFHIRILYFAFSILCFLTISMFVLTFCYVSQLRETRLCLPEASGEPYVR
GTATISQSDRSHREFAGTGGHPNANTLNDNFHQIFEDGNDLEAEKGRKHGAETGENGIYS
EKTRNLSAIRKEDGDISRRARRNVNGVNGRRLQVLATVPISIPLSSIANVCNWTNGECPT
GPKGNPGPVGLTGQIGQRGLPGPRGEPGVRGKRGDRGPKGQAGENGDRGARGEKGDMGLS
GPQGPPGIQGTQIDNCSCLVMNISALLQRLNELTANKTSLLNFVQMSIAKTVTCGCPGPP
GPVGPQGEVGPKGDRGLVGLTGSTGDKGERGSLIDGEGHILHGPPGPKGDQGISGSRGPK
GDPGLDGVDGIMGLPGFKGEAGPRGILGEVGDPGPMGMKGSKGDMGPMGTRGQIGYDGQK
GRKGETGIMGHRGVPGSTGPFGPKGIKGDQGKRGEIGYPGLTGSSGPPGVPGTPGRDGMK
GQKGERHIYVLPDGNVSPTEYSSLTPSDSNPTTKPANIEPEKMFKIYEPIVKSQCRLTNI
SSPREIHAMTRSYGAWMKDTSMDSRHPDMIWVTMHHRGAILIEYKNLDEMKRRRLSATFA
LPFQWDGAGHVVYNGSFYYHHLNKDYIIRYDLTTGSIIERAHVPSLGYASDDLFQLSSGY
TNVDFAVDENGLWIIYPVTRPGSVGKLTVSKLDPESLEIITTITTDHNFESTANAFIVCG
VLYTTKGPHSRPSRVDFAFDLFREVVLEDISMNIQNRHRKTVMLSYNPRDRLLYGWDKGK
LLTYDVAIKEYTDD
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggccacggataaacaaaatgaatgctcatgttccttccatatcagaatcctctacttt
gctttttcaattctctgttttctcacaatttcgatgtttgtgctaacattctgctacgta
tcgcaattgcgagaaaccaggctctgcctccccgaagcttcaggggaaccctacgttcga
ggaaccgctaccatttctcaaagcgatcgctcgcaccgtgagtttgctggaacgggaggc
cacccaaatgctaacactttaaatgacaattttcatcaaattttcgaagatggaaatgat
ttggaagctgagaaaggcagaaagcatggtgcggaaacaggagaaaatgggatttacagt
gagaaaactaggaacttgagcgcaatcagaaaggaagatggggatatttctcggcgagct
agaaggaatgtgaatggagtgaatggtagaaggcttcaagtattagcaacagtgcccata
tctattcccctttcttcaatagcaaacgtatgcaactggacaaacggagaatgcccaaca
ggtccaaaaggaaaccctggtcctgtaggattgactggtcaaatcggtcagaggggtctt
cctggaccaagaggagagccgggtgttagagggaagcgaggagatcgaggacccaagggc
caagcgggagaaaatggagatcgaggggctcgtggtgaaaaaggagacatgggtttatct
ggaccacaaggacctcctggtattcaagggactcagattgacaactgttcatgcctggta
atgaatatatcagctcttctccagcgcctcaacgagctcacagctaacaagacgtctctc
ttgaactttgtgcagatgtctatcgcaaaaacggttacctgtgggtgccccggaccacca
ggccccgtgggtccccagggagaggttgggccaaaaggggataggggtttggtcggcctt
acaggatctaccggggataagggcgagcgtgggtctctgatagacggtgaaggacacata
ttgcatggtccacccggacctaaaggagaccaaggcatttctggttcaagaggtcctaag
ggggatccagggcttgacggtgttgatgggataatgggtctacctgggtttaaaggagaa
gctggtcctcgtggtattctgggtgaagtgggggatcctggaccgatgggaatgaagggt
tccaaaggggatatgggtccgatgggaaccaggggccagattgggtacgatggtcagaag
ggtcgcaagggagaaacgggtatcatgggacacagaggtgttcctggatcaacaggaccg
tttggaccgaaaggaatcaaaggagatcagggcaagagaggcgagataggctaccccggt
cttacgggttcatctggtccgccaggagtgcccggaacaccaggccgtgacggaatgaaa
gggcaaaaaggagaaaggcatatttatgtgctcccagatggtaatgtgtcgcctacagaa
tattcttctctcaccccatcggactcgaacccaacaaccaagccagctaacatcgaaccc
gaaaagatgttcaaaatctacgaaccaatcgtgaaatcacagtgccgtttgacgaatatt
tcttctccacgtgagatacacgctatgacaagatcatacggagcctggatgaaagacacc
tctatggatagcagacatcctgatatgatatgggttactatgcatcaccgtggtgcaata
ctcatagagtacaagaatcttgatgaaatgaaaaggcgtcgcctctcagcaaccttcgca
ttgcctttccagtgggatggtgccggtcacgttgtatacaatggatcgttctactatcat
catctcaacaaagattatatcattcgatatgacttgactacaggatccattattgagcgc
gcacatgttccatctctaggttatgccagcgacgacttgttccaactatcatccggatac
accaacgtcgatttcgccgtggatgaaaacggtctgtggatcatatacccagtcactcgc
cctggatcggtcggaaaactcaccgtatccaaactcgaccctgaatcactggaaatcatc
acaactatcacgacggatcataacttcgagtcaacggccaatgcgttcattgtctgtgga
gtcttgtacacgaccaaaggaccgcatagccgaccatcgagggtcgattttgcttttgac
ttgtttagagaggttgtattggaggatataagtatgaatattcaaaacagacatcgtaaa
actgtgatgctctcatataatcctcgggatagactcctctatggatgggataaaggaaaa
cttctgacttatgatgtcgccatcaaggaatatacagacgattaa
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