Strongylocentrotus purpuratus (purple sea urchin): 115918569
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Entry
115918569 CDS
T01019
Name
(RefSeq) mRNA export factor-like isoform X1
KO
K14298
mRNA export factor
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115918569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
115918569
03036 Chromosome and associated proteins [BR:
spu03036
]
115918569
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115918569
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115918569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_EML
PAC11
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
eIF2A
ANAPC4_WD40
Beta-prop_ACSF4
WD40_RFWD3
ASA1
Beta-prop_EIPR1
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_RSE1_2nd
Beta-prop_SCAP
Beta-prop_Nup120_160
ExoI_SH3
Beta-prop_VPS8
WD40_like
Motif
Other DBs
NCBI-GeneID:
115918569
NCBI-ProteinID:
XP_030839228
UniProt:
A0A7M7SXU7
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MFGTSTAFGASSSGVFGQTNTSGTHNPMKDIEVTSPPDDSISSLRFSPASIPNTFLIAGS
WDNNVRCWEIQSSGQTIPKAQQTHTGPVMDVDWHDDGTKVFTASCDNTAKMWDLNSNQAI
QIAQHDGPIKSIRWVKAPNYSCVMTGSWDKTIKFWDTRQPNPILSIQLPERCYCADVMYP
MAVVGTADKNVIIYQLENQPSEFRRMDSPLKYQLRCLAIFKDTKKNAPTGFALGSIEGRC
AIQFVQAANPKDNFTFKCHRTNGASYNSQDIYAVNSIAFHPEYGTLATCGSDGKFSFWDK
DARTKLKTSEQMEQPITCAAFDAKGQIFAYAVSYDWSRGHEFYNPQKKNYIFLRGNATEE
LRPRNRRR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggacgtccacagccttcggcgccagctcgtccggtgtgttcggccagaccaac
acgtcaggaacgcacaacccgatgaaagacatcgaagtcacctctccaccggatgatagc
atcagctccttacgattcagcccagcttcgatcccaaacacattcctcatcgctgggtca
tgggataacaatgttcggtgctgggagatccagagcagtggtcagactatccctaaggct
caacagactcacactggtcctgtcatggatgtagattggcacgatgatggcacgaaagta
ttcacagcttcttgtgacaacacagccaagatgtgggatctcaacagtaatcaagccatt
caaattgcacagcatgatggacctatcaagtccatacgttgggtaaaagcaccaaactac
tcctgtgtcatgaccggcagctgggataaaaccatcaagttctgggatacccgacaaccg
aaccccatcctaagcatccagcttccagagaggtgctattgtgctgatgtgatgtacccg
atggccgtagtgggcacggctgacaagaacgtcatcatctaccagctagagaaccagcct
tcagaattcagacggatggattcaccactcaaatatcagctgagatgccttgccatcttc
aaagacacaaagaagaacgcaccaacagggtttgccttgggtagcatcgagggaagatgt
gcaatccagtttgtgcaggcagccaacccaaaagacaactttaccttcaaatgccacagg
accaatggagcctcatacaacagccaagatatctatgcagttaactcaatagcattccac
ccagagtacggcacactagctacatgtggctcagacggcaagttcagtttctgggacaag
gatgctaggacaaaactgaagacgtcagaacagatggaacagccaatcacatgtgccgct
tttgatgccaagggtcagatatttgcatacgccgtcagctatgattggtcaaggggacac
gagttctacaacccacagaagaagaactacatcttcctgcgaggaaacgccacagaggaa
ctacgcccaagaaatagaaggaggtag
DBGET
integrated database retrieval system
