Strongylocentrotus purpuratus (purple sea urchin): 115918780
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Entry
115918780 CDS
T01019
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115918780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
115918780
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115918780
Spliceosome [BR:
spu03041
]
Complex C
Other components
Step II factors
115918780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
S1
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
nSTAND_NTPase5
AAA_30
PhoH
AAA_16
TsaE
Sigma54_activ_2
NB-ARC
UvrD-helicase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
115918780
NCBI-ProteinID:
XP_030846224
UniProt:
A0A7M7T163
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MDELERLEHLSLVSKVCTELDNHLGLNDKDLAEFIISLADKHDTLEDFKSVLVENGADFP
ESFTGNLLRLIQHMKPKKVRRDGEDEARPNDKKDEKRQAFPGLCIPDKPAVREMLEGDKQ
VAMDAMDELEALMPRNLAAQIKQEAGDEPESRKSGKDDSRARSRSRSPDHDKPRKHKTKH
KDRDRDRERDRDMDRDRDRDRDRDRDRDRKKRRSRSRSRDRDRRRSRSRDRSRRHRSRSR
SRERSDKRKYRDRDDGGKEAEGGDSRKEKYNDKFVDRPPSLEPEVGEVYEGKVTSVMQYG
CFVQLSLRRRCEGLVHISELRKEGRVAEVTDVVSKGQQVKVKVLSIAGTKIRLSMKDVDQ
NSGEDLNPAKAKNAPETNEEEGMNPCRPADLPLINPPDSDDVAIRKRVQRVTSPEKWELK
QMMAASCIDKADFPDFDETTGILPKDEDNSDEEIEIELREEDPPFLRGHGRQSVDLSPVR
IVKNPDGTLSKAAMMQSALAKERREMKQATERAEAENIPTGMNKNWIDPMPESERTLVAN
IRKTGMTSQELPEWKKSAFGGNKASYGKKTKLSIVEQRQSLPIYRLKKELVQAVDENQIL
IVIGETGSGKTTQITQYIAEAGYTIRGKIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGY
TMRFEDCTSPETKVKYMTDGMLLRECLIDPDLTQYSVLMLDEAHERTIHTDVLFGLLKKA
VKKRPDVKLIVTSATLDAVKFSAYFFEAPIFTIPGRTFPVEILYTKDPETDYLDASLITV
MQIHLTEPPGDILLFLTGQEEIDTACEILFERMKSLGPEVPDLLILPVYSALPSEMQTRI
FDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDQLVVTPISQAQA
KQRAGRAGRTGPGKTYRLYTERAYRDEMLPTAVPEIQRTNLASTLLSLKAMGINDLLAFD
FMDAPPTETLITAMEQLHSLSALDDEGLLTKLGRRMAEFPLEPMLSKVLIMSVHLGCSEE
TLTVVSMLSVQNVFYRPKDKQGLADQRKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCFE
NFVQARTLRRAQDVRKQLLGIMDRHKLDVVTCGKNTARVQKAICSGFFRNAAKKDPQEGY
RTLVDGQVVYVHPSSALFNRQPDWVIYHELVLTTKEYMRECTTVDPKWFVELAASFFRFS
DPTRLSKAKKQQRLEPLYNKYEEPNAWRISRQRLRRN
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctagaacgtctagaacacctgtcccttgtatctaaagtgtgtacagaactg
gacaaccatcttggactaaatgacaaagatctcgctgaattcatcatcagtcttgctgac
aagcatgacaccctggaagacttcaagtccgttctggtggaaaacggggccgacttcccg
gagtcattcaccggcaacctgctgcgtctcatccagcacatgaagcccaagaaggtgcgg
agagacggggaggatgaagcaaggccaaacgacaagaaggacgagaagaggcaggccttc
cccgggctatgtattcctgataaaccagcagtcagggaaatgttggagggagacaagcaa
gttgcaatggatgcaatggacgagttagaagctctcatgcctagaaatttagcagcacaa
ataaaacaagaagctggagatgaaccagagtcgaggaagtctggcaaggatgacagcaga
gctaggagtaggagcagaagccctgaccatgacaaaccccgcaagcacaaaactaagcac
aaagatagagatagggacagagaaagagacagagatatggacagagatagagatagagat
agagacagagacagagacagagatagaaagaagagacgctctcgatcccgtagccgtgat
cgcgacaggaggcgtagcaggagccgcgatcgcagtcgcaggcataggagcaggagcagg
agcagagagcgcagcgacaagcggaaataccgtgatcgggacgatggtggtaaagaagcg
gaaggcggcgactccaggaaggagaagtacaatgataaatttgtggacagaccgccctcg
cttgagccggaggtgggggaggtttacgaagggaaggttacgagtgtgatgcagtatggt
tgctttgtacagctctctctcaggagaaggtgtgagggcttggtgcatatatccgagctg
aggaaagaaggaagggtcgctgaagtcactgatgtcgtgtcaaaaggtcaacaggtcaag
gtcaaggtactctccatcgcaggaaccaagattagactttccatgaaagatgttgatcag
aattcaggagaggacttgaacccagccaaagcaaagaatgcccccgagacgaacgaggaa
gagggcatgaacccgtgccgacctgccgacctgccgctgatcaaccctccggactctgat
gatgtggccatcaggaagagggtccagagggtcacttctcctgagaagtgggaactcaaa
cagatgatggcggcaagttgcatagacaaggccgacttccccgactttgatgagacaacc
ggtatccttccaaaggatgaggataactcagatgaggagattgagattgagctgagggag
gaggacccgcccttcctgagaggtcatggcagacagagtgttgacctcagtccagtcagg
attgttaagaatcctgatggaaccctgtccaaggctgccatgatgcagagcgccttggcc
aaggagagacgggagatgaaacaagcgacggagagagcagaggctgagaacatccccacc
ggaatgaacaagaactggattgatcccatgcctgagagtgaacgaactctcgttgccaac
atccgtaagaccggtatgaccagtcaggagttgccggagtggaagaaatcggcctttggt
ggaaacaaggcttcctacggaaagaaaaccaagctctccatcgtggagcagaggcagagt
ctgcctatttatagactcaagaaggaactggtgcaggctgtggatgagaatcaaatcctc
atcgtcattggagagaccggcagtggaaagaccacccagattacccagtacatcgcagag
gctggctacactatccggggcaagatcggatgcacgcagcctcgtcgggtggccgccatg
tccgttgccaagagggtgtctgaagagtttgggtgcagacttggacaagaggttggttac
accatgcgttttgaagactgcacgtcaccggagaccaaagtcaagtacatgacggacggt
atgctgctgagggagtgtctgatagacccagacctgacccagtactcggtcctgatgttg
gacgaggcccacgagaggaccatccataccgacgttctctttggactactgaagaaggcc
gtcaagaagagacccgacgtcaagctaatcgtgacctcggccacgctcgatgccgtcaag
ttctcagcgtatttcttcgaagctcccattttcactattcctggccgcacattccctgtg
gagattctctacaccaaggaccctgagactgactatctggatgcttccctcattaccgtc
atgcaaatacatcttacagaacctccaggtgacattcttctcttcttgaccggtcaggag
gagatcgacacggcctgtgagatcctttttgagaggatgaaatcacttggtccagaggta
cctgatctacttattctacccgtctactccgcccttcccagcgagatgcagacaaggatc
tttgatccagcccctcctggtagtaggaaggtcgtgattgccactaacattgctgaaacc
tccctgaccatcgacggtatctactacgtggtggaccctggttttgtcaagcagaaggtg
tacaactccaagacgggcatggaccagctggtcgtaacccccatctcccaggctcaggcc
aagcagagggcagggagggccggcaggaccggtcctggcaagacctaccgcctctacacc
gagcgtgcctatcgagacgagatgctccccacggcggtgccggagatccagcgcaccaac
ctggctagtacccttctgtcactgaaagccatgggcatcaacgaccttctggcgtttgac
ttcatggatgccccgcccacggagacgttgatcactgccatggagcagctccattcgctg
agtgcgttggacgatgaaggactgctcaccaaactgggaagaaggatggccgagtttcct
ctagagcccatgctgtccaaggttctcatcatgtccgttcatctgggttgcagcgaagag
accctcactgtggtatccatgctctctgtgcagaacgtcttctatagaccaaaggacaag
caaggtctagcagaccaacgcaaggccaagttccaccagccagagggagatcatctgacc
ctgctggccgtctataactcctggaagaacaacaagttctccaacccttggtgctttgag
aactttgtccaggctcgtaccctgcgcagggctcaggatgtccgcaaacagctcctggga
attatggacaggcacaagttagatgtggtgacttgtggaaagaacacagctagggttcag
aaggctatctgcagcggtttcttcaggaatgctgctaagaaggatcctcaagagggatat
aggactcttgttgacggtcaggtcgtctatgtccatccttcaagtgctctcttcaacaga
caaccagattgggtgatatatcatgagcttgtgctgacaaccaaggaatacatgagggaa
tgcaccacggtcgatccgaagtggtttgtggaactcgccgcttccttcttccgcttctcc
gacccgacccgtctgagcaaggccaagaagcagcagcgtcttgagcccctctacaacaag
tacgaggagcccaacgcatggagaatctccaggcagagattgcgcagaaactga
DBGET
integrated database retrieval system
