KEGG   Strongylocentrotus purpuratus (purple sea urchin): 115919051
Entry
115919051         CDS       T01019                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018  RNA degradation
spu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115919051
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115919051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spu03019]
    115919051
   03041 Spliceosome [BR:spu03041]
    115919051
Messenger RNA biogenesis [BR:spu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115919051
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     115919051
Spliceosome [BR:spu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    115919051
 Complex C
  U2 snRNP components
    115919051
SSDB
Motif
Pfam: LSM SM-ATX DUF5471
Other DBs
NCBI-GeneID: 115919051
NCBI-ProteinID: XP_030853997
UniProt: A0A7M7PM85
LinkDB
Position
Unknown
AA seq 95 aa
MLFYSFFKSLVGKDVIVELKNDLSIGGTLHSVDQFLNIKLTDISVTDQERYPHMLSVKNC
FIRGSVVRYVQLPADECDTQLLQDAARKEATQSKA
NT seq 288 nt   +upstreamnt  +downstreamnt
atgctgttctactctttcttcaagtccttggtgggcaaagatgtgatagtggagctcaag
aatgatctcagtattggtggaacgctccattcggtggatcagtttctgaacatcaagctg
acagatatatcagtgacagaccaagagaggtatccacatatgctttctgtgaagaactgt
ttcatccgagggtcagtggtgcgatacgttcagctgccggcagacgagtgcgacacacag
ttattacaggacgctgctcggaaagaggcaacacagagcaaagcttga

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