Strongylocentrotus purpuratus (purple sea urchin): 115919116
Help
Entry
115919116 CDS
T01019
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5-like
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
115919116
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115919116
Spliceosome [BR:
spu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
115919116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
115919116
NCBI-ProteinID:
XP_030856319
UniProt:
A0A7M7PSY7
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
METQTGQARMGAPGSLRTAHAINERERTSDVLTEENSNVDFSSMFLSEPVTAGLQKVGFE
KPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIA
VQIQDTIRAIGCEMEGLRSHVFIGGTLFGPDRQKLKKCHIAVGTPGRIKQLIEYEVLKTG
TIRLFVLDEADKLLDDTFQEQVNWIYNHLSDNKQMLALSATYPEYLAKHLTKYMREPMFV
RLNPKDLALRGIKQLYVELPGHSLPNKAFEIKVIKLLKILTQVSFNQCLIFSNLQTRAQN
LCDILCDSGWPSECISGAQEQSQRLSAMAKLKKFQCRILISTDLTARGIDAENVNLIINL
DIPTDTKTYLHRIGRAGRFGTHGAAISLASKGREMELLRNIQRQCRVTMTELPDPPPSDL
LKQDHNSTGLQRVSITPHSLLPAAKMDSTRNTTTDDLENNATAKTSDDALLTSSVVNKEE
DPMPKSVIANGTDEQHSLHMGINGSCHKMEDSADSLADRKTTKIVESMVNQNPIPKTRRG
VHEPQKVDACIQTMQEDVVQPKAKTSQIRYVTGSGDHKDRPTLPIGFEDAPEVRKLSLPQ
VSHIKRGDGSRRARTWYEGKESFEKFMKGQTVETKGQGSEDDRVDKETDVIEQTVKNDKE
LSVEISQLEGEENDADVTSRNSHVTSSNDLNIGDDYQNKYKDEVYNGSGNADHEIAQKRI
SGLTPIQEIERYRGLLCDTFIRNHLGRGDNSTLIKLEHHDEAITAVTEAKETESVESVTP
LMDISSVVNKQVARKLGDKQDAKQTQCTSKVTKDIQESDETVKVPQVESRLHHQVSNGSP
DIRSRNEPETETKPKARNTTGGKKKGKQQRIKQHVFQMSTLGALMSPKELDVALISNPNT
SLCDGDLDTNDTDREKVERFPLCNKINVTHQVHHAKNGYEESQIPESGERETLKDKQVRT
SVQKSLSLENDSSVSSLDDPVWAIFKNFIPACLPSEVGRKDATLSDQSSSSLCESNTSTC
SSSSSETDSGSSGTNGEEEEDGKEASESNRKNKWKGKEPARNGSGKHHMGLNQAKAKEKN
LSKANSSYNEEKHYCEGQNKYPQCPDDPSWTTEQFPINQAVM
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcagaccggccaagcaaggatgggagctccgggttccttgagaacagcccat
gctatcaatgaaagggagagaaccagtgatgttttgactgaagagaacagcaatgttgac
ttctcatctatgttcctttccgaacccgtgacggccggattacagaaagttggttttgag
aaaccttcacctattcaattaaaggcaataccacttgggagatgcggtttagacttgatt
gtccaggctaagtctggcacagggaagacgtgtgtgttcagtgtcatagctctagaggga
atagatctcaccaatccatctactcaggttctgattctagcccccacgagagagattgca
gtccagattcaagacactattcgagctataggatgtgagatggagggactacgttctcat
gtgtttatcggaggtactctatttggaccagacaggcagaagttgaagaagtgtcacata
gctgttggtacaccaggtcgtatcaaacagctaattgagtatgaagtattgaagaccgga
actatcaggctttttgtcttggatgaagcagacaaactacttgatgatacatttcaggag
caagtcaattggatttacaaccacctttcagataacaagcagatgttagcactctctgca
acctaccccgagtaccttgccaaacatctcactaaatatatgagagaacctatgtttgtt
cgactcaatccaaaggatctcgcattaagaggcatcaagcagttgtatgtggagttacct
ggccactctcttcctaacaaagcatttgagatcaaggttatcaaactgctgaaaatcctg
actcaagtatccttcaatcaatgtctcatcttctccaacttacagacaagggctcagaat
ctatgtgacatcctctgtgactctggttggcctagtgagtgtatatcaggtgcacaggag
cagtctcaacgactcagtgctatggccaagctaaagaaattccagtgtcggatcctcatc
tctacagatctaactgccagaggtatcgatgctgagaatgtcaacctgatcatcaaccta
gacattccaaccgacaccaagacctaccttcatcgcattgggagggcggggcgcttcggt
acccatggagctgctatcagccttgcttccaagggtagggagatggaactactcaggaat
atccagcgtcagtgtcgagtgacaatgacagagctacctgatcctcctccatctgatttg
ctgaagcaggaccacaactcaacgggacttcaacgggtttctattacaccacattctctc
ctccctgcagccaagatggattctacaagaaataccaccacagatgatctggaaaacaat
gctactgctaaaacatcagatgatgctttgttgacttcctcagttgtgaataaagaagaa
gaccccatgccaaaatctgttatcgcaaatgggacggatgaacaacattcactccatatg
ggaatcaatgggagttgtcacaagatggaagatagtgctgatagtttagcggataggaag
acaacaaagattgtggaaagtatggtgaaccaaaatcctataccaaagactagaagagga
gtccatgaaccacagaaagttgatgcatgtatccaaactatgcaggaagatgttgttcaa
ccaaaggccaagacatcacagataagatacgttactggaagtggggatcacaaagacaga
ccgacattaccgattggctttgaagatgccccagaagtgaggaagctcagtcttcctcaa
gtgtcccatattaaaagaggagatggatcaagaagagctcgtacctggtatgaaggtaaa
gaatcgtttgaaaagttcatgaagggtcaaacagtggagactaaaggtcaagggtcagaa
gatgacagggtagacaaggagacggatgtcattgagcagacagtgaaaaatgacaaggaa
ctgtcggttgaaatatcacagttagaaggtgaagaaaatgatgcagatgtgacttctaga
aactctcatgtcacatcaagcaatgatctcaatattggtgatgactatcagaacaaatac
aaagatgaagtctacaatgggagtggaaatgcagatcatgaaattgcgcagaaaaggatc
tctggcttaacacccatccaagagatagagaggtacaggggtctactctgtgatacattt
atacgcaatcacttaggaaggggagacaactctactttgatcaaacttgaacatcatgat
gaggcaattacagctgtaacagaggcaaaagagacagagtcagtagaaagtgtgactcct
ttaatggacatttcttcagtcgtgaacaagcaagtggcaagaaagttaggagataagcaa
gatgcaaaacagacccagtgcacatcaaaagtaaccaaagacattcaagaaagcgatgag
acagtcaaagttccacaggttgaaagtaggcttcatcaccaagtctccaatggttcccca
gacatccgatcaaggaatgaacctgaaacagaaactaaaccaaaggctaggaatactaca
ggaggaaagaagaaagggaagcagcaaagaatcaaacaacatgtctttcagatgagtacc
ctcggtgctctgatgtctcccaaagaacttgatgtagctctcatcagcaatccaaatacc
agcttgtgtgatggtgatttggacactaatgatactgacagagaaaaagttgaaagattt
cctttgtgtaacaagataaatgtgacacatcaagttcatcatgcaaaaaatggttatgaa
gaaagccaaattccagaatcgggtgaaagagaaaccttgaaggacaaacaagtgagaaca
tcagttcagaaaagtctttccctagaaaatgacagttctgtgtcatcattagatgaccct
gtgtgggcaattttcaaaaatttcattccagcatgtcttccatcagaagttggtagaaag
gacgccacactgtcagatcagtcttcaagcagtttgtgtgagagtaacacaagcacttgt
agctcttcttcaagtgaaactgatagtggaagcagcggtaccaatggagaagaagaggaa
gacggcaaggaggcatctgagagcaaccgcaagaataagtggaaaggaaaggaacctgca
agaaatgggagtggaaagcaccacatggggttaaatcaagccaaagcaaaggagaagaat
ctttctaaagctaatagcagctacaatgaagaaaagcactactgtgaaggacaaaataaa
tatccacaatgtccagatgatcctagttggacaactgaacaatttccaatcaaccaagct
gtaatgtag
DBGET
integrated database retrieval system
