Strongylocentrotus purpuratus (purple sea urchin): 115922489
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Entry
115922489 CDS
T01019
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04382
Cornified envelope formation
spu04512
ECM-receptor interaction
spu04518
Integrin signaling
spu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115922489
04518 Integrin signaling
115922489
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115922489
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115922489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spu04147
]
115922489
00536 Glycosaminoglycan binding proteins [BR:
spu00536
]
115922489
Exosome [BR:
spu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
115922489
Glycosaminoglycan binding proteins [BR:
spu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115922489
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
115922489
NCBI-ProteinID:
XP_030837276
UniProt:
A0A7M7NJM8
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MSSVDVCCSHVFILFAGISGFPGFEGQRGDRGDYGPDGFPGGPGLRGENTQGPPGLPGPQ
GPDGRPGRKGQPGSLGAKGERGFTGEFGLRGEPGDPGVPGVPGRKFNGYNGRPGRGGSPG
SLGPRGEIGDPGPGGVNGPPGPPGIIGVRGVPGDLGDLGPSGFPGFQGRPGQNGMFGNRG
PRGLSGGPGDAGYPGFQGMEGSRGFDGNPGPEGNIGNPGPSGRVGEPGIPGADGFPGGPG
LAGADGERGQMGGIGDVGPPGPGGEPGPRGDFGTPGIPGNSGLVGLPGRRGETGPDGPSG
ETGPLGIKGYPGNPGRNGFPGLRGARGEKGDDPEIRIPTEVNRGEAGAPGDPGPTGLGGI
VGDVGPQGGNGFPGRRGIPGIEGPPGPEGEPGLPGLVGFRGPIGEDGPKGGPGPNGETGE
SGLKGFPGYNGIRGQKGNSGRGGFPGFPGEPGGAGEIGSQGPRGAKGYPGLKGDRGITAP
IGSRGEPGTPGTPGGPGERGYLGRPGFEGPKGLQGMKGDLGEQGQPGPLPPDLGPGPQGM
QGVPGIPGLRGYKGFVGDFGVIGVIGEKGTKGRPGIFGLKGAPGPPGQPGFNGVKGDGGD
PGLAQKGLKGEQGEQGFAGFPGRIGLPGIDGPLGPPGPKGRDGLFGDFGPSGLPGRNGEP
GMPGFPGDSGESGYGGRPGSPGPKGMGGNTGIRPNRGHFITRHSQSRNVPSCPAGTVELW
RGFSVLFSMGNGHAHHQDLGDAGSCLQRFSTMPFLFCNFNNVCNYASRNDRSYWLTTNEP
LPMMPLMNQQIDPYISRCTVCEAPTQSLAIHSQSQEIPQCPGGWRSLWTGYSFTMYTAAS
EGGGQGLESVGSCLENFRATPFIECNGRGNCHFFSNEYSFWLTVIDEEDQFAIPRKRTIK
SGQLQSVVSRCRVCQKVN
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtagatgtgtgttgcagtcatgttttcattctttttgcaggtatctctggt
ttccctggttttgaaggtcagcgaggtgatcgaggcgattatggaccagacggatttcca
ggtggacctggtctaagaggagagaacacccaagggccccctggtcttcctggtcctcag
ggacctgatggcagaccaggtcgcaaaggtcagcctggatcattaggtgctaagggtgag
cgaggtttcacaggagagtttggccttcgtggagaaccaggagacccaggagtcccagga
gtacccggcaggaaattcaatggttacaatggcagaccaggaaggggaggttctccaggc
tccctagggcctcgtggtgaaattggagatccaggaccaggtggagtgaacggaccaccc
ggaccaccaggtatcattggagtgaggggagtaccaggagatttaggagatctaggacca
agtggtttcccaggattccaaggaagaccaggacaaaatggaatgtttggaaaccgagga
ccaaggggactttctggaggccctggtgatgcaggttatcctggatttcaaggaatggaa
ggcagccgaggatttgatggaaatccaggaccggagggaaacattggaaaccctggtcca
agtggtcgagttggagaacctggtatcccgggagcagatggtttccctggaggtccaggt
ctagccggagcagatggtgaaaggggccagatgggtggtataggagacgtaggaccccct
ggacctgggggagaaccaggacctagaggagactttggaactccaggcataccaggaaac
tcaggtctagttggactgccgggcagacgaggagaaactggtccagatggtccatcaggt
gagaccggacctcttggaatcaaaggatatccaggcaacccaggacgaaacggtttccca
ggtctgcgtggagccagaggagaaaagggagatgatcctgaaatcagaatccccacagag
gtcaatagaggtgaagcaggagccccaggagatccaggaccaacaggactaggagggata
gtcggagatgtaggtccccaaggaggaaatggtttccccggtcgtagaggaatacccggt
atagagggtccaccaggacctgagggagaaccaggactaccaggtctagttggattccga
ggaccaattggtgaagatggacccaaaggaggaccaggtcctaatggagagacaggtgaa
tccggattgaagggcttcccaggatacaacggcatccgtggtcagaagggtaactctgga
cgaggaggcttcccaggattccctggtgaaccaggcggagcgggagagataggatcccaa
ggtcctcgcggggcgaaaggttaccctggtcttaaaggagaccgtggaataacagctcca
ataggaagcagaggagaaccaggaacaccaggaacaccaggagggccaggagaaagaggt
tatctaggtaggcctggatttgaaggtcctaaaggtctacagggaatgaagggagatctt
ggtgagcaaggacaaccaggtcccttaccaccagaccttggaccaggcccacaaggaatg
caaggagttccaggaataccaggcttgagaggttacaagggatttgttggagactttgga
gtaataggagtaattggagaaaaaggaacaaagggaaggccaggaatctttggactcaag
ggtgccccaggacctccaggtcagcctggattcaatggagtgaaaggagatggaggagat
cctggtcttgcccagaaaggactgaagggagaacaaggagaacaaggatttgctgggttc
ccaggaaggattggtttaccaggcatcgatggaccgctgggacctccaggacccaaagga
agagatggtctatttggagactttggtccatctggtctaccagggcgcaatggagagcca
ggaatgccaggtttcccgggagacagtggagagtctggatatggaggacgacctggatca
cctggtcctaagggaatgggaggaaacaccggtatccggcccaaccgagggcacttcatc
acccgtcacagccagtccaggaatgtaccctcctgtcccgcaggcaccgtggaactgtgg
cgtggattcagtgttctcttctccatgggcaatggccatgctcaccatcaagatctaggt
gatgctggctcttgcttgcaacgtttcagcaccatgcccttcctcttctgcaacttcaac
aacgtctgcaactacgccagccgcaatgaccgctcctactggctgaccaccaacgagccc
cttcccatgatgcccctgatgaaccaacagattgacccttacatcagtcgttgcactgtg
tgtgaggctcccactcaatcccttgcgattcacagccagtcacaggagattccacagtgt
ccaggagggtggaggagtctatggacagggtacagtttcactatgtacacagcagcttct
gaaggcggtggccaaggccttgaatccgtcggctcctgcctggagaacttccgtgccacg
cctttcatcgagtgcaatggcagaggtaactgtcacttcttctcaaacgaatacagcttc
tggttaacagtcatcgacgaggaagaccagtttgccattcccaggaaacgcactatcaaa
tcaggacagctacagtcggtggtcagccgctgcagagtgtgtcaaaaagtcaactaa
DBGET
integrated database retrieval system
