Strongylocentrotus purpuratus (purple sea urchin): 115923505
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Entry
115923505 CDS
T01019
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115923505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
115923505
Enzymes [BR:
spu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
115923505
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115923505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_bind
CAF1
Motif
Other DBs
NCBI-GeneID:
115923505
NCBI-ProteinID:
XP_030840173
UniProt:
A0A7M7NQV1
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MTGLNDLMSKCDEEPFRRPHIVIPPSGFVDYTANQKFHEAAYDAYVTGVCFATMANYIGT
FLTPPKPRVSPTSNLIEPFLNKMFLHRIADMPYLNLDGPDLQPSRDHIFHVRFPSEWKST
DLYDLFTPFGNIMISWIDDKSAMVGLMKKDRASQVRRTLEKNPLYQVTSYADYKKSQFMA
GDFVPFPAFQEAPSSAEAKTPGSPRGKKRAMVDESPDKLADFDDPEVASFMSSTAKKLKQ
MDPNATPFVSRKSVTPPIPSSEGKKLDRASSEDNEAAAKEPTKLFEESASW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcctgaatgatctaatgagcaaatgtgatgaggaacctttcagaagaccacat
atagtgataccgccctcaggcttcgtagactacacagctaatcagaagttccacgaggct
gcgtacgacgcctacgtgaccggtgtgtgcttcgccaccatggccaactatattggcact
ttcttgaccccgcccaagcccagagtgtccccgacgtcaaacctcatcgaaccattcctc
aataagatgtttctacacagaattgcagatatgccatacttgaatttagacggaccagat
ttgcaaccttccagagatcacatcttccatgtgcgctttccgtcggaatggaaatcaact
gacctctatgacctcttcactccctttggcaacatcatgattagctggattgacgacaag
tccgctatggttggcttgatgaagaaagatagagcctcacaggttcgacggaccctagag
aagaaccctctctaccaggtcacatcctacgcggactacaagaaatctcagttcatggct
ggagactttgtccccttcccagctttccaagaagccccctcctccgccgaggcgaagaca
cccgggagccctcgtggaaagaagcgtgccatggttgacgagtccccggataaattggcc
gatttcgacgacccagaggtcgctagctttatgtcaagtacggccaagaagctcaaacag
atggatccaaatgctaccccctttgtctcgagaaagagcgttacgccacctataccatct
tcagaaggcaagaaactagatagagcaagcagcgaggataatgaggctgcagccaaggaa
cctacaaagttgtttgaagaatccgccagttggtag
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