Strongylocentrotus purpuratus (purple sea urchin): 373182
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Entry
373182 CDS
T01019
Symbol
COLP3alpha
Name
(RefSeq) 3 alpha procollagen precursor
KO
K06237
collagen type IV alpha
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04512
ECM-receptor interaction
spu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
373182 (COLP3alpha)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
373182 (COLP3alpha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spu04147
]
373182 (COLP3alpha)
00536 Glycosaminoglycan binding proteins [BR:
spu00536
]
373182 (COLP3alpha)
Exosome [BR:
spu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
373182 (COLP3alpha)
Glycosaminoglycan binding proteins [BR:
spu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
373182 (COLP3alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
373182
NCBI-ProteinID:
NP_999631
UniProt:
Q07265
LinkDB
All DBs
AA seq
1752 aa
AA seq
DB search
MKYREVLERHVFVCLSLLIIVFAYWADAAACVGCLSATCICNGTKGERGDRGYVGFPGPP
GPGGFPGVEGPPGYKGQKGNLGIAGSGGPKGFRGSLGNPGIPGIPGIPGEPGQEGPPGEP
GIPGCNGTKGERGPSGPTGFGQPGSPGPRGDPGPQGPPGDTTYGLKGIKGEPGRLGRDGY
PGTPGDSGPTGPKGISGDPGLLGSKGTRGLKGEPGQPGVQYQGGKGEKGSVGTQGLPGES
CRDQAATGNDTTIVQGRPGPKGDQGEYGDKGDKGFLGMKGMKGPKGQYGLKGEKGLSGPQ
GPRGKIGKDGTPGNQGMKGSPGIPGNPGPTGFNGQLGDKGDRGPKGRVGPPGPPGPSVPV
NDKGTKGLPGPSGRHGSAGPRGYPGEKGRTGYDGKAGQPGPPGSAGDRGVPGPVGIGEKG
EPGNPGIPGMPGPNGFQGLPGRDGPKGDKGMAGLTIQGLPGMDGRPGPDGPAGLPGQVGD
AGPQGLIGEPGNGLPGDPGPKGQTGRDGPRGIPGDVGSSGQPGLPGPQGSKGEACAACRS
GEIGPKGDPGQSGEIGQPGQPVYNGNSGPSGPKGDRGLRGLTGRDGQDGPQGPPGSTGRP
GNKGQLGLQGEVGFTEPGPRGIQGDPGLKGDNGLNGEPGPPCEPGAVKVNGEKGALGPPG
PPGRDGVPGYQGQKGDRGLPGDSLRGSNGEKGDQGPRGERGTYGSPGDKGEVVYYETGTQ
GPKGEPGNPGTAGPPGPAGPTGNQGLPGDQGPDGYQGEKGSQGQSGPPGNSIPGSPGEKG
AQGIPGDVGQPGQPGPTGPLGNPGIPGAFGEKGDFGPQGNPGGQGLRGLTGQPGQPGIGG
ERGNIGDPGTRGRDGIPGQAGGKGETGPGGLPGGPGIKGEPGLSIPGQDGSSGTPGRDGA
PGGPGEPGPSGPRGEPAQPLLEETRITRLNGQRRPPGQPGDNGAPGNDGEPGPAGQIGVK
GSPGPLGPGGSQGPPGSPGPIGAPGEKGERGGMGTPGSPGPSGSPGAKGEPGLPGPLGEK
ESRGPGGVPGSKGESGIPGRSGGIGSPGSIGLPGLNGVKGEPGIPGNSGIPGGRGLNGEP
GPAGFKGFQGLLGVKGDFGIKGQMGFPGPKGDNAQMGIPGQNGGEGFPGRSGIPGPQGAP
GSPGEPGTDGSNGGPGSKGEKGQPGIIRDLLAGWRKGVKGDPGRTGPEGAKGNPGLPGIP
GESGDAGLPGSEGRPGQPGTSGPPGPPGPNGEPGLIGRTGTPGDPGPRGERGSYGTPGED
GIPGVKGDSGDPGLMGLPGGPGLPGPGGPPGESGFPGVRGVKGIPGTPGLSALGIKGEPG
FPGLKGDSGQPGLNGGSGSIGLPGMKGTKGETGPVGPRSPLPPVIPGPKGEIGIPGANGD
RGDKGDRGEPGRPGFQGRPGESGSPGLNGQMGDPGGPGFQGLKGSKGEPGPIPNVFEMKG
VKGDRGGPGPDGPQGPPGRDGRPGPQGPPGLTGDKGTPGVQGNPGVSGVPGEPGLKGEQG
FRGQNGQPGDPGFPGTKGEAGIPGSSSGFFITRHSQTTSIPQCPQGTAKMWHGYSLLFVQ
GNERGHGQDLGKPGSCLKRFSTMPFLFCNINNVCHVASRNDYSYWLSTTEPMPMNMAPIR
GGQLQPFISRCVVCEAPAQVLTVHSQTVNIPDCPDRWGVLWIGYSFMMHTGPGGEGSGQM
LSSPGSCLEDFRSSPFIECHGDGKCNYYATTYTFWLSSITGNAQFTMPQSETLKAGSLRT
RVSRCAVCLRNQ
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacagagaagtattggaaaggcacgttttcgtgtgtctctcgctacttattatt
gtcttcgcttactgggcagatgcagcggcctgtgtaggatgtctatcagcaacatgtata
tgcaatggaacgaaaggagaaaggggtgacaggggatatgtaggctttcctggacctcct
ggccccggagggttcccaggagttgaaggaccaccaggatacaaaggacaaaagggaaat
ctaggaattgcaggatcaggaggacctaaaggattcagaggaagcttgggtaatcccggt
attcctgggatccctggaatcccaggagaacccggacaagaaggacctcctggagaacct
ggtattcctggctgcaatggaacaaagggagaaaggggtccatctggacctacagggttc
ggacaaccaggatcaccaggaccgaggggagatccaggaccacaggggccacctggtgac
actacttatggattgaaaggaatcaaaggagaacctggaagactcggcagagacggatac
cctggaacacctggagattctggaccaactggacctaaaggaatatctggagatccaggt
ctattaggttccaaaggaacacgaggtttaaaaggagaacccggacaacctggagttcag
taccaaggtggtaaaggagaaaagggtagcgtaggtacgcaaggattgccgggtgagtct
tgtagggatcaggcagcaacgggaaacgatacaaccatcgtccaaggacgtccgggtcca
aagggagaccagggagaatatggagacaaaggagataagggattcctcggaatgaaagga
atgaagggcccaaagggacagtatggtctgaagggagagaaaggactatcaggccctcaa
ggacccaggggtaaaattggcaaagatggcactccaggcaaccaaggaatgaagggatca
cctgggataccaggcaaccctggaccaacaggattcaatggtcaactgggagacaaggga
gacagaggaccaaaaggaagagtaggaccccctggaccaccgggtccctccgtacccgtt
aatgacaaaggaactaaaggacttccaggtccttctggacgtcatgggtctgcaggacct
agaggatacccaggagagaagggaagaactggttatgatggaaaggctgggcagcctgga
ccccctggatctgcaggagatagaggagttcctggacctgttggcatcggagagaaagga
gagccaggcaacccaggtatccctggcatgcctggacctaatgggttccagggcttacca
ggccgagatgggcctaaaggagacaaaggtatggcaggactgaccattcaaggtcttcct
ggaatggatggacgtccaggaccagatggacctgctggactgcctggacaagttggagat
gctggacctcaaggtctcattggagaacctggtaatggtttgcctggagatcctggtcct
aaaggacaaactggacgtgatggacctcgtggtatacctggtgatgtaggatcttctgga
caaccaggattacctggaccacaaggcagcaaaggagaagcctgcgctgcttgccgctct
ggtgagataggacctaaaggagatccaggacaaagtggtgagataggacaacctggtcaa
cctgtctacaatggcaattctggaccaagtggacctaaaggagacagaggtctaagaggc
cttacaggaagagatggacaagatggaccacaagggccaccaggtagcaccggccgtcct
gggaacaagggacaacttggccttcaaggagaggtaggctttactgaaccaggaccaagg
ggaattcaaggggacccaggactgaagggagacaatggtctgaatggagagccaggacca
ccatgtgaaccaggtgccgtcaaagtcaacggagaaaagggggctctaggaccaccaggt
cccccaggccgcgatggagttccaggataccagggacagaaaggagaccgtggactccca
ggagatagcctccgtggaagtaatggagaaaagggagaccaaggaccacgaggagagcgt
ggaacttacggatccccgggagataaaggtgaagttgtttactatgaaactggaacacaa
ggacctaagggagagcccggtaatcctggtactgctgggcctccaggaccagctggacct
actggaaatcagggacttccgggtgaccaaggtccggatggataccaaggtgagaagggc
tcccaaggacaatcaggacctccaggaaactccattccaggttctccaggagagaaaggt
gcccaaggcatcccaggagacgtaggacaacctggtcaacctggaccaaccggaccactg
ggtaaccctggaatccctggagctttcggcgagaagggagactttggacctcaaggaaac
ccaggtggacagggactgcggggcttgacaggacaaccaggtcaaccaggtatcggagga
gaaaggggtaacattggtgaccctggaacaagaggtcgagatggtatcccaggacaagca
ggaggaaagggtgaaactggaccaggagggctacctggtggtccaggaatcaaaggagaa
cctggtctatctatccctggtcaggacggatccagtggaaccccagggagagatggagcc
ccaggaggccctggagaacctggaccctcaggcccgcgtggagaacctgcacagccgctc
ttagaggagacaaggatcaccagacttaatggtcagaggcgacctccaggtcaacctgga
gacaacggagcccctggaaatgacggagaacctggtccagccggacaaattggagtgaaa
ggatcgccgggaccacttggacctggaggatcacaaggaccacctggatcacctggaccg
attggagcacctggagaaaagggggaacgtggtggcatgggaacgccaggatcaccaggg
ccctctggttcgccaggagctaaaggagagccaggtttgccaggaccactcggtgagaag
gaatcccgtggaccaggtggtgtaccaggatccaaaggagaatcaggaattccaggaaga
tcaggaggtattggatctcctggctccattggtctaccaggactgaatggtgtgaaggga
gaaccaggtataccaggaaacagcggcattccaggaggaagaggactaaatggagagcct
ggacccgccggattcaagggattccaaggtcttctaggggtaaagggagatttcggtatc
aaaggacaaatgggcttccctggacctaagggagacaatgcccagatgggaatcccagga
cagaatggaggagaaggtttccccggaaggagtggtattcctggacctcaaggcgctcct
ggtagcccgggcgaacctggaaccgatggatcgaatggaggaccgggatcgaagggagaa
aagggacaaccaggaatcatcagagatcttcttgcaggctggaggaaaggagtcaaggga
gatcctggacggacaggtcctgagggggcaaagggcaatcctggtcttccagggatccca
ggtgagtccggagatgcaggactcccaggatcagagggtagaccaggtcaaccaggaaca
tctggacctcctggaccaccaggaccaaatggagaacctggtcttataggaaggaccgga
acaccaggagacccaggaccaaggggagaacgcggctcctatggaaccccaggagaagat
ggtatcccaggagttaaaggagactctggagatcctggcctcatgggactaccaggagga
ccaggtctaccaggaccaggcggacctccaggagaaagtggattcccaggtgtcagagga
gtaaagggtattcctggaactcctggtttatctgcacttggcatcaagggagaacctggt
ttccctggacttaagggagactccggtcaacctggtctaaatggtggatctggatcaatc
ggtctacctggcatgaagggaactaaaggagaaacaggccctgttggtcctaggagccca
ctgccccctgtcatccctggtcctaagggagagatcggtattcccggagcaaacggagac
cgaggagacaagggagataggggagaacctggtagaccaggattccaaggaaggccagga
gaatcaggaagcccaggtcttaacggccaaatgggagatcctggaggacctgggttccag
ggactcaaaggaagcaagggagaaccgggtccaatccctaacgtctttgaaatgaagggt
gtgaaaggagaccgtggtgggcctggtcccgatggtcctcagggaccaccaggacgagac
ggacgtccaggtccacagggaccaccaggtctgacaggagataagggtacgcctggagta
caggggaatcctggagtaagtggtgttcccggagagccaggactcaagggagaacaagga
ttccgtgggcagaatggtcaaccaggagaccccggtttcccaggaaccaagggtgaggca
ggtatccccggttcgtcctctggattcttcattactcgtcacagtcagaccacctccatc
ccgcagtgtccccagggaacggccaagatgtggcacgggtacagtttgctcttcgtacag
ggtaatgagcgaggccacgggcaggatctgggcaaacctggcagctgcttgaagcgattc
agcaccatgccattcctcttctgcaacatcaacaacgtttgtcacgtggcatcgcgaaac
gactactcctactggctgtcgaccacggagcccatgccaatgaacatggctccgatcaga
ggcggtcagctccagcctttcatcagcaggtgtgtcgtgtgtgaggccccagctcaagtg
ctgaccgtgcacagccagacggtcaatattccagactgcccagacaggtggggggtcttg
tggatcggatacagttttatgatgcacaccggacctggtggtgagggatcaggacagatg
ttgtcctccccaggatcctgtttggaggacttccgctcctcgcctttcatcgaatgccac
ggcgacggcaaatgcaactattacgccaccacatacaccttctggttgagctccattaca
ggcaatgctcaattcaccatgccccaatcagagacactcaaggccgggtcactgaggaca
cgagtcagtagatgtgccgtatgcctcagaaatcagtaa
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integrated database retrieval system
