Strongylocentrotus purpuratus (purple sea urchin): 373269
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Entry
373269 CDS
T01019
Symbol
COLP4alpha
Name
(RefSeq) alpha2(IV)-like collagen precursor
KO
K06237
collagen type IV alpha
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu04382
Cornified envelope formation
spu04512
ECM-receptor interaction
spu04518
Integrin signaling
spu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
373269 (COLP4alpha)
04518 Integrin signaling
373269 (COLP4alpha)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
373269 (COLP4alpha)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
373269 (COLP4alpha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spu04147
]
373269 (COLP4alpha)
00536 Glycosaminoglycan binding proteins [BR:
spu00536
]
373269 (COLP4alpha)
Exosome [BR:
spu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
373269 (COLP4alpha)
Glycosaminoglycan binding proteins [BR:
spu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
373269 (COLP4alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
373269
NCBI-ProteinID:
NP_999676
UniProt:
Q26640
LinkDB
All DBs
AA seq
1747 aa
AA seq
DB search
MLYFSSSLRSLWRWSVLVIFLLVIVQSSKAQERRCDDTCRKCNCKGRKGGRGPPGFVGNK
GTPGPPGADGEQGVPGLKGDGGFPGESGSRGPKGDLGRSGIPGFSGHKGYTGVPGPHGVQ
GTPGIPGCNGSQGVPGPQGPGLIGPPGDKGPDGFKGRPGTPGLFTPSPRGEVGEDGVPGQ
DGRPGFDGFIGNGGSKGDRGPKGRQGMGGDPGESGTPAERPTVLPRGEKGDQGDPGPAGP
RYVDKTPDDNTLDGAKGAKGYKGEYGPRGMDGMKGATGEVGDLGSYGDYGEKGLPGYSGE
RGFPGNPGIPGLLGMNGEKGRDGPQGRPGYDGYKGPSGDYGMDGDPGPAPDIEEIVVGVG
PPGDEGPPGNPGPRGFSGAIGLFGDQGQPGYPGPMGGPGPRGPTGSQGEGRDGEKGESGR
PGIPGFQGETGERGNDGNFGERGEKGNMGESRPGPPGMDGSRGRQGFMGQKGGRGPPGRA
GPAGPARSGNQSFQGFPGDTGNTGLKGMRGIQGALGRDGRPGSKGELGGICPFCPPGIKG
YPGDRGYPGDPGSPGQDGAPGVEGLKGNPGEVGFIGLDGNNGNQGPPGQPGPDGSPGLNG
EPGQPGPYRRGQQGPKGYAGPKGATGVPGVMGTVNLKVPVGINLTGETGDQGPRGPDGRD
GLQGPQGFQGEEGSRSYGPNGERGRPGDPGPPGEEGPKGRAGPPAIRPDEPKGFQPGLYG
EPGPRGPIGRPGLPGFDGEPGPRGDPGFAGFPGGIGDTGPAGRSTFGPKGFPGIRGDKGV
EGRFGRTGENGPQGGPGPVGLYGLKGAPGEAGPDGFPGTSGPQGLPGTPGDAGIKGEKGL
GGTPGISGFPGFEGQRGDRGDYGPDGFPGGPGLRGENSQGPPGLPGPQGPDGRPGRKGLP
GSLGAKGERGFTGEFGLRGEPGDPGVPGVPGRKGFNGYNGRPGRGGSPGSLGPRGEIGDP
GPGGVNGPPGPPGIIGVRGVPGDLGDLGPSGFPGFQGRPGQNGMFGNRGPRGLSGGPGDA
GYPGFQGMEGSRGFDGNPGPEGNIGNPGPSGRVGEPGIPGADGFPGGPGLAGADGERGQM
GGIGDVGPPGPGGEPGPRGDFGTPGIPGNSGLVGLPGRRGETGPDGPSGETGPLGIKGYP
GNPGRNGFPGLRGARGEKGDDPEIRIPTEVNRGEAGAPGDPGPTGLGGIVGDVGPQGGNG
FPGRRGIPGIEGPPGPEGEPGLPGLVGFRGPIGEDGPKGGPGPNGETGESGLKGFPGYNG
IRGQKGNSGRGGFPGFPGEPGGAGEIGSQGPRGAKGYPGLKGDRGIPAPIGSRGEPGTPG
TPGGPGERGYSGRPGFEGPKGLQGMKGDLGEQGPPGPLPPDLGPGPQGMQGVPGIPGLRG
YKGFVGDFGVIGVIGEKGTKGRPGIFGLKGAPGPPGQPGFNGVKGDGGDPGLAQKGLKGE
QGEQGFAGFPGRIGLPGIDGPLGPPGPKGRDGLFGDFGPSGLPGRNGEPGMPGFPGDSGE
SGYGGRPGSPGPKGMGGNTGIRPNRGHFITRHSQSRNVPSCPAGTVELWRGFSVLFSMGN
GHAHHQDLGDAGSCLQRFSTMPFLFCNFNNVCNYASRNDRSYWLTTNEPLPMMPLMNQQI
DPYISRCTVCEAPTQSLAIHSQSQEIPQCPGGWRSLWTGYSFTMYTAASEGGGQGLESVG
SCLENFRATPFIECNGRGNCHFFSNEYSFWLTVIDEEDQFAIPRKRTIKSGQLQSVVSRC
RVCQKVN
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgttatattttagttcgtcattacggagtctatggaggtggtcggtgttggtgatattt
cttctagttattgttcaatctagtaaagcacaagagagacggtgtgatgatacatgcaga
aagtgcaactgtaaaggcagaaaaggaggaaggggcccaccaggcttcgtcgggaacaag
ggaactccaggcccaccaggtgcggacggggaacaaggagttccaggtctaaagggagat
ggaggcttccctggggaatcaggttctaggggacccaaaggagatctaggtcgatcaggt
ataccaggtttttcaggccataaaggatacacaggtgtaccaggcccgcatggtgttcaa
ggtactccaggtatcccaggatgcaacgggagtcagggagtaccaggaccacaaggtcca
ggactaattggacccccaggagataaaggccctgatggtttcaaaggacgacctggcacc
ccgggtctgttcacaccatcacctagaggtgaagttggtgaagatggggtacccggacaa
gacggtcgacctggctttgatggcttcatagggaacgggggatccaaaggagatagagga
cctaaaggacgacagggcatgggtggagatccaggagaatcaggcacacctgctgaacga
cccactgttctacctaggggagaaaagggagatcaaggagacccaggccctgctggtcca
agatatgtggacaaaactccagatgataacaccctagatggagcaaaaggagcaaaagga
tacaagggtgaatatggaccaagaggaatggatggaatgaagggtgctacaggagaagtg
ggtgatttaggatcatatggtgactatggagaaaagggattgccaggttacagtggagaa
agaggttttcctggtaatcctggtattcctggccttctaggcatgaatggagaaaaagga
agagatggccctcaaggaagaccaggatatgatggctacaagggaccttctggagactat
ggaatggatggagatcccggacctgcccctgacatcgaggaaatcgtggtaggagttggc
cctcctggcgacgaaggaccacccggtaacccaggtcctagaggcttctcaggagctatt
ggactttttggtgatcaaggacagcctggttaccctggacccatgggaggtccagggcca
cgaggcccaactggatcacaaggagaaggaagagatggagagaagggagaatcaggacgt
ccaggtatacctggcttccaaggagagactggtgaacggggaaacgatgggaactttgga
gagcgaggagagaagggtaacatgggagagtctagaccaggaccccctggtatggatgga
tcaagaggacgtcagggtttcatgggccaaaaaggaggacgtggacctcccggaagagct
ggacctgctggaccagcgaggtctggtaatcagagtttccaaggatttccaggagacaca
ggtaatacaggattgaaaggaatgaggggtattcaaggagctctaggaagggatggacgt
ccaggaagcaagggtgagcttggaggtatctgccccttctgtccaccaggaatcaaaggc
taccctggagaccgaggttaccctggggatccaggttcccctggacaggatggcgctcca
ggagtcgagggactcaaaggaaacccaggagaagtaggattcattggcttggatggaaac
aatggaaaccagggtccacctggtcaacccggacccgatggtagtccaggtttgaatgga
gaaccaggacagccaggaccatacagaagaggtcagcagggtcccaaaggatatgcagga
ccgaaaggagctacaggagtacctggtgtcatgggaaccgtcaatcttaaagtgcccgtg
gggattaatctgactggtgaaacaggagatcaaggtccacggggtccagacggccgtgac
ggactccaaggaccacaagggttccaaggagaagaaggtagtcgttcatatggtccaaat
ggtgaaaggggtagaccaggagatcctggaccacctggtgaagaaggacccaagggacgt
gcaggaccacctgcgatacgtccagatgaacctaaaggattccaaccaggactttacgga
gaaccaggaccacgtgggccaattggccgtcctggcctgccaggctttgatggagagcct
ggtcctcgtggagaccctggatttgccggctttccaggaggtataggagacactggtcct
gcaggacgttcaacctttggacctaaaggattccctggtatacgaggagacaaaggtgtg
gaagggcgttttggccggaccggagagaatggcccacagggtggacctggacctgttggg
ctatatggattgaagggtgctcctggagaagctggtccagacgggtttcctggaacttct
ggtcctcaaggacttcctgggactcctggagatgccggaataaagggagagaagggtctc
ggaggaacaccaggtatctctggtttccctggttttgaaggtcagcgaggtgatcgaggc
gattatggaccagacggatttccaggtggacctggtctaagaggagagaactcccaaggc
ccccctggtcttcctggtcctcagggacctgatggcagaccaggtcgcaaaggtctgcct
ggatcattaggtgctaagggtgagcgaggtttcacaggagagtttggccttcgtggagaa
ccaggagacccaggagtcccaggagtacccggcaggaaaggattcaatggttacaatggc
agaccaggaaggggaggttctccaggctccctagggcctcgtggtgaaattggagatcca
ggaccaggtggagtgaacggaccacccggaccaccaggtatcattggagtgaggggagta
ccaggagatttaggagatctaggaccaagtggtttcccaggattccaaggaagaccagga
caaaatggaatgtttggaaaccgaggaccaaggggactttctggaggccctggtgatgca
ggttatcctggatttcaaggaatggaaggcagccgaggatttgatggaaatccaggaccg
gagggaaacattggaaaccctggtccaagtggtcgagttggagaacctggtatcccggga
gcagatggtttccctggaggtccaggtctagccggagcagatggtgaaaggggccagatg
ggtggtataggagacgtaggaccccctggacctgggggagaaccaggacctagaggagac
tttggaactccaggcataccaggaaactcaggtctagttggactgccgggcagacgagga
gaaactggtccagatggtccatcaggtgagaccggacctcttggaatcaaaggatatcca
ggcaacccaggacgaaacggtttcccaggtctgcgtggagccagaggagaaaagggagat
gatcctgaaatcagaatccccacagaggtcaatagaggcgaagctggagccccaggagat
ccaggaccaacaggactaggagggatagtcggagatgtaggtccccaaggaggaaatggt
ttccccggtcgtagaggaatacccggaatagagggtccaccaggacctgagggagaacca
ggactaccaggtctagttggattccgaggaccaattggtgaagatggacccaaaggagga
ccaggtcctaatggagagacaggtgaatccggattgaagggcttcccaggatacaacggc
atccgtggtcagaagggtaactctggacgaggaggcttcccaggattccctggtgaacca
ggcggagcgggagagataggatcccaaggtcctcgcggggcgaaaggttaccctggtctt
aaaggagaccgtggaataccagctccaataggaagcagaggagaacctggaacaccggga
acaccaggagggccaggagaaagaggttattcaggtaggcctggatttgaaggtcctaaa
ggtctacagggaatgaagggagatcttggtgagcaaggaccaccaggtcccttaccacca
gaccttggaccaggcccacaaggaatgcaaggagttccaggaataccaggcttgagaggt
tacaagggatttgttggagactttggagtaataggagtaattggagaaaaaggaacaaag
ggaaggccaggaatctttggactcaagggtgccccaggacctccaggtcagcctggattc
aatggagtgaaaggagatggaggagatcctggtcttgcccagaaaggactgaagggagaa
caaggagaacaaggatttgctgggttcccaggaaggattggtttaccaggcatcgatgga
ccgctgggacctccaggacccaaaggaagagatggtctatttggagactttggtccatct
ggtctaccagggcgcaacggagagccaggaatgccaggtttcccgggagacagtggagag
tctggatatggaggacgacctggatcacctggtcctaagggaatgggaggaaacaccggt
atccggcccaaccgagggcacttcatcacccgtcacagccagtccaggaatgtaccctcc
tgtcccgcaggcaccgtggaactgtggcgtggattcagtgttctcttctccatgggcaat
ggccatgctcaccatcaagatctaggtgatgctggctcttgcttgcaacgtttcagcacc
atgcccttcctcttctgcaacttcaacaacgtctgcaactacgccagccgcaatgaccgc
tcctactggctgaccaccaacgagccccttcccatgatgcccctgatgaaccaacagatt
gacccttacatcagtcgttgcactgtgtgtgaggctcccactcaatcccttgcgattcac
agccagtcacaggagattccacagtgtccaggagggtggaggagtctatggacagggtac
agtttcactatgtacacagcagcttctgaaggcggtggtcaaggccttgaatcggtcggc
tcctgcctggagaacttccgtgccacgcctttcatcgagtgcaatggcagaggtaactgt
cacttcttctcaaacgaatacagcttctggttaacagtcatcgacgaggaagaccagttt
gccattcccaggaaacgcactatcaaatcaggacagctacagtcggtggtcagccgctgc
agagtgtgtcaaaaagtcaactaa
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integrated database retrieval system
