Strongylocentrotus purpuratus (purple sea urchin): 373332
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Entry
373332 CDS
T01019
Symbol
HMG1
Name
(RefSeq) high mobility group protein 1 homolog
KO
K10802
high mobility group protein B1
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03410
Base excision repair
spu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
373332 (HMG1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
373332 (HMG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spu03036
]
373332 (HMG1)
03400 DNA repair and recombination proteins [BR:
spu03400
]
373332 (HMG1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spu04147
]
373332 (HMG1)
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
373332 (HMG1)
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
373332 (HMG1)
MMR (mismatch excision repair)
Other MMR factors
373332 (HMG1)
Exosome [BR:
spu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
373332 (HMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
DUF755
Motif
Other DBs
NCBI-GeneID:
373332
NCBI-ProteinID:
NP_999708
UniProt:
P40644
LinkDB
All DBs
AA seq
200 aa
AA seq
DB search
MGKKDRDSSKPRGRMSAYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKG
VFHEKSMRDKVRYDREMQSYKPPKGEKNKRRRRRKDPDAPKRNLSAFFIFSGENRAAIKS
VHPNWSVGDIAKELAVRWRAMTAGEKIPFDKGAAKDKERYIKAMAEYKAKAKPMKRQVKE
SSSSSSSDSSSDDSSSDDSD
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaggaccgagacagttcgaagccgcgtggacgtatgtctgcatacgcttac
tttgtacaggattccagagcagagcatggcaagaaccaccctaacagtcctgtcaggttt
gcagagttctccaaagattgctcagcaagatggaaggctctggaggagaagggaaagggt
gttttccatgagaagtctatgcgtgacaaggttcgatacgatcgtgagatgcagtcctac
aagcctcctaagggtgagaagaacaagaggagacgtcgcaggaaggacccagatgcaccc
aagaggaatctgtcagcattcttcatcttcagtggagagaacagagcagccataaagagt
gttcatcccaactggtctgtgggtgatatcgccaaagaactggccgtcaggtggagagct
atgactgctggggaaaagattccgtttgacaaaggtgctgctaaggacaaggagagatac
atcaaggccatggccgagtacaaggcaaaggcaaaacccatgaagcgtcaagtcaaggaa
tcctccagctcaagttcctctgattccagctctgatgattcaagttcagatgatagcgat
tag
DBGET
integrated database retrieval system
