Strongylocentrotus purpuratus (purple sea urchin): 574793
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Entry
574793 CDS
T01019
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
574793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
574793
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
574793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_Vps41
WD40_RFWD3
PROPPIN
CFAP43_N
PEP5_VPS11_N
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
574793
NCBI-ProteinID:
XP_780284
UniProt:
A0A7M7RCI6
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MEGGGGGPPRHQGHQGHQGHQGHQGHQGQGQFFHQPRLPYYQIKPNYYSNHRRPHHHRHQ
EHGPTNATTFDQKRMKNNLQRRTVDYNTSVIKYLQTRIWQRDYKDARMIQPDHSYIGNLS
LPHQMLDNPINAVTTRFVRTSTNKVRCPIFCVVWTPEGRRLVTGASSGEFTLWNGLTFNF
ETILQAHECAVRTMTWSRNDMWLLTGDDQGFIKYWQSNMNNVQMYQAHKDQAVRCASFAP
LDTKFCTCSDDGTVRIWDFLRCHEEKILRGHGADVRCVDWHPSKSIVVSGSKDSQQPVKL
WDSRTGESLCTLHAHKSTVMSVKWNMNGNWLLTASRDHLVKLFDIRMMKELFTFRGHKKE
ATSIAWHPIHEDMFVSGGSDGGILFWQVGHDKEIGGIEEAHESIIWSLAWHPLGHMLCSG
SNDHSTKFWTRNRPGDKMRDRYNLNTLPIGTSEDLLEFDDDTTSLPVIPGMGLEYGVADH
LKKDEPVAMPVAEENLDTSIPGLDSSLEELERLKPKPQRKVPYARPVPQNFLDEWEANKA
PGVAPNIEEEKRKKKEEEDKKKQEEDAKKRAEGEKKRKETELKRKMDKPESFGLVNIPDF
GGNPIEVIKFIAKSQGPKAAQQALVNVIQTNLPSGTVLPIIKPHVNPIMVLLTEGHIPPH
FAKRLRAGGLLPLEAVRWMDKKEGNGERPLPPHLAKLPIAVPPTKKEKGDAIPDKPGEAD
KENEASKEQIVDGDSAPNNGTDSKGLLGDKPPSGGPNAPGAGLLPDPGQGGGLLPEPKTP
GAAKSQPPPLMQTLPKEALLPEPDANEGTGDVDMRQGPLFGDVDMRQGPVVGLSGPLLEP
RSGPMSGPPIRPGPPTQELQRRNGPVVRQSDGFGQDRDERVSGAGRGDVDLRQEPQHLEN
MGDRELRQGPPQRFNGPSNHSFERQMPMQDVDNRRFPLMGADDEGIPGLGSEDQDLRGGP
PVPLMSIESPIARTREPLDRDFRQGNHGEFPNPGRDFDERPLPIMDHEEFPPLPHRKRPW
EEEQGPGPGHEDPERWEEGPGMMDEGPGFGGHDMGGGMGRGMRGRGGFRPDMGRGGFRGR
GRGWGRGRGRGRGMW
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggaggagggggaccgccaaggcatcagggccaccagggacaccagggccac
cagggccaccagggacaccagggccagggacagttctttcatcagcctcgactgccatac
taccagatcaagcccaactattacagcaatcatcgtagaccgcaccatcacagacatcaa
gaacatgggccaacgaatgccacgacctttgaccagaagaggatgaagaataacctgcag
aggcgaacggttgattacaatacgtcagtcatcaaatatcttcagacaagaatttggcag
cgggactacaaggatgcaagaatgatacagccagaccactcatatataggaaatctgagt
ttgcctcatcagatgttggacaaccctatcaatgcagtaacaactcgattcgtgcggact
tcaaccaacaaggtccgatgccctatattttgcgttgtgtggacaccagaaggaaggagg
ctggttactggggcgtcgagtggggagtttactttgtggaacggacttacgtttaatttt
gaaacaattcttcaggcccacgagtgtgccgtccggacgatgacgtggagtcgcaacgac
atgtggctactgaccggagatgaccaaggcttcatcaagtattggcagtccaacatgaac
aacgtgcagatgtatcaggcccacaaagaccaagccgtccgatgcgcaagctttgcgccg
ttagataccaagttctgcacctgctcggacgacgggaccgtgcgaatctgggacttcctg
cgatgtcacgaggagaagatccttagaggtcatggtgctgacgtgcggtgcgtcgactgg
catccgagcaagagcatcgtcgtgtccggcagcaaggactcccagcagccggtcaagctg
tgggactcccggacgggggagtccctctgcaccctccacgcccacaagtccaccgtcatg
tcggtcaagtggaacatgaacggtaactggcttctgaccgcgtccagggaccacctggtc
aagctctttgacattcgcatgatgaaggagctgttcacattcagggggcacaagaaagag
gcaacatccatagcatggcatcctatacatgaggacatgtttgtatcaggaggctccgat
ggaggcattctcttctggcaagttgggcatgacaaggagattggaggtatcgaagaggca
catgaatctatcatatggagtctggcatggcatccattgggccatatgttatgttcagga
tccaacgatcactcaacgaaattctggacaagaaacagacccggggataagatgagggac
agatacaatctgaatactctgcccattggaacctcagaggacctcctggagtttgatgat
gacacaacatctcttcctgtcatccctggtatgggattggagtatggcgtcgcagaccat
ctcaagaaagacgaaccagttgcaatgccggtggcagaggagaacctcgacacctccatc
cccggtctcgactcctccctcgaagagctggagagactgaaacccaaaccccaacggaag
gtcccctacgctagaccggtcccccagaacttcctggacgaatgggaggccaacaaggcc
ccgggcgtggcacctaacatcgaggaggagaagaggaagaagaaagaggaagaggataag
aagaagcaggaggaggatgctaagaagagggccgagggggagaagaagagaaaagagacg
gaactaaagaggaagatggacaagccagaatcatttggccttgtcaatattccagacttt
ggaggtaatcctattgaggtcatcaagttcattgccaagtcacagggacctaaagctgct
caacaagctttggtgaacgtcatccagacgaaccttccttcaggtaccgtgctacccatc
atcaagcctcatgtcaatccgatcatggtcctcctcacagaaggccacatccctccacac
tttgccaagagactgcgggcagggggactcctgccactcgaagcagtaagatggatggac
aagaaggagggtaacggagagagaccactacccccacacctcgccaagctacccatcgct
gtcccgccaaccaaaaaggagaagggggacgccattccggacaaaccaggcgaagcggac
aaggaaaacgaggcgtccaaggagcagattgtagatggtgattccgcacccaacaacggg
acggatagtaagggtctgctgggagataagcctccgagtggaggaccaaacgcgccaggt
gccggtttgttgcctgatcccggtcaaggtggagggttgttgccagaaccaaagactcca
ggagctgcaaagtcacaacctcctccacttatgcagacactaccaaaggaagcattgctg
cctgaacctgatgcaaatgaaggaacaggagatgttgatatgaggcaaggacccctgttt
ggggatgttgatatgagacaaggaccagtagttgggttgtcaggcccactcttagagcca
aggagtggtcccatgagtggaccaccaataagaccagggccacccacacaggaactacag
cggagaaatgggcctgttgtgagacaatctgatggctttggacaggatcgtgacgagcgt
gtctcaggtgcgggacgtggagatgtcgatttgcgtcaggagccacagcacttggagaat
atgggggacagggaactccggcaaggtccccctcaacgctttaatggcccaagcaatcat
tcctttgagcgacaaatgcccatgcaggatgtggacaatcgcaggtttcccctaatggga
gccgatgatgaaggcatccccgggcttggttcagaagaccaagacctacgtggtggccca
cctgttcctttgatgtccattgagagccccatagcaagaactcgagaacctctagataga
gatttccgacaagggaaccatggggagttcccgaatcccggcagagatttcgacgagaga
ccactcccgattatggatcacgaagagttcccaccattgcctcaccggaagcgaccgtgg
gaggaagaacaaggaccaggaccagggcatgaggatccagaacgttgggaagaaggtccc
gggatgatggatgaaggtcctggatttggagggcatgacatgggtggtggaatgggtagg
ggcatgagaggtcgtggtgggtttagaccagacatgggaaggggagggtttaggggcaga
ggtagaggttggggtagaggaaggggaagggggaggggaatgtggtag
DBGET
integrated database retrieval system
